YALI0E25135g

Overview

Description highly similar to uniprot|P32485 Saccharomyces cerevisiae YLR113w HOG1 ser/thr protein kinase of MAP kinase (MAPK) family
Locus type CDS
Locus tag YALI0E25135g

Location

Species Yarrowia lipolytica Positions 3009327..3010667
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1341 (nuc.)
Previous locus YALI0E25113g Next locus YALI0E25157r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E25135g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E25135gYALI0E25135g_mRNA-001YALI0E25135g_CDS-001

Nucleotide sequence

 

>YALI0E25135g
ATGGCGGACTTTATCCGGACCCAGATCTTCGGCACGTGTTTCGAAATCACGTCGCGATAC
GTGGATCTCAACCCCGTGGGGATGGGAGCCTTTGGTCTCGTGTGTTCGGCCAAGGACCAG
CTCACGGACCAGAACGTGGCCATCAAGAAAATCATGAAGCCGTTCGGCACTCCCGTGCTG
TCGAAACGGACGTACCGAGAGCTCAAGCTGCTCAAGCACCTGCGCCACGAAAACCTCATT
TGCCTGAGCGACATTTTCATCTCGCCGCTGGAAGACATTTACTTTGTCACCGAGCTGCTG
GGCACAGACCTGCACCGTCTGCTCATGACCCGGCCTCTGGAGAAGCAGTTCATTCAGTAC
TTTCTTTACCAGATTCTGCGAGGCCTGAAGTACGTGCACTCTGCCGGTGTGGTCCATCGA
GACCTCAAGCCGTCCAACATCCTCGTCAACGAGAACTGCGACCTGAAAATCTGCGACTTT
GGCCTTGCCCGAATCCAGGACACCCAGATGACCGGCTACGTGTCGACCCGGTACTACCGA
GCGCCTGAAATCATGCTCACGTGGCAGAAGTACGATGTGGAGGTGGATATTTGGTCCACG
GGCTGCATCTTCGCCGAGATGCTGGAGGGCAAGCCCCTGTTCCCCGGCAAGGACCACGTG
CACCAGTTCTCCATCATCACCGAGCTGCTGGGCTCGCCCCCAGAAGATGTGATTCACACC
ATCTGCTCGGAAAACACTTTGAGGTTCGTCAGAACTCTGCCCCGGCGAGAACGAATCCCT
CTGGCGTCCAAGTTCCGAAACGCCGACCCCGAGGCCATCGATCTCATGGAGAAAATGCTG
GTTTTCGACCCCAAAAAGCGAATAACCGCGGCCGAGGCTCTGGCCCACCCTTACTTGGCA
CCATACCACGACCCCAGCGACGAGCCTGTAGCCGAGGAACGGTTCGACTGGTCGTTCAAT
GACGCAGACTTGCCGGTGGACACATGGAAGGTGATGATGTACTCGGAGATTCTCGACTTC
CACAATGTGGACATTGACGTCAACGGCCAGCCTCCACAGGGCCAGTTTGAGCAGGTCCAT
GCCCAGGCACAAGCGGCCGTCGCACAGAACGAGGCTGCCAGGGCTAGGGAACAGGAGCAG
CAGCAGCAGGAGCAGCAGTAAACACCCAAACAATGTGGGTCAAAGACGGACAAGGCAATC
AGTAATAGGAGGACAGCATGGCTGACGTGATATAAGTGATGTAATTAAGTGTAGGATTAT
GGAGCAGCGATGTGATGACACGCCATCTTATCGTGAACTAGTTAGGAACATAGCTCGAAT
TGAACAGATGAGACACTGACG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E25135g_CDS-001

Protein length: 387 aa.
Product: Serine/threonine protein kinase of MAP kinase (MAPK) family, putative

>YALI0E25135g_CDS-001 MADFIRTQIFGTCFEITSRYVDLNPVGMGAFGLVCSAKDQLTDQNVAIKKIMKPFGTPVL
SKRTYRELKLLKHLRHENLICLSDIFISPLEDIYFVTELLGTDLHRLLMTRPLEKQFIQY
FLYQILRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARIQDTQMTGYVSTRYYR
APEIMLTWQKYDVEVDIWSTGCIFAEMLEGKPLFPGKDHVHQFSIITELLGSPPEDVIHT
ICSENTLRFVRTLPRRERIPLASKFRNADPEAIDLMEKMLVFDPKKRITAAEALAHPYLA
PYHDPSDEPVAEERFDWSFNDADLPVDTWKVMMYSEILDFHNVDIDVNGQPPQGQFEQVH
AQAQAAVAQNEAARAREQEQQQQEQQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG