YALI0E25113g

Overview

Description weakly similar to uniprot|Q5AHI4 Candida albicans hypothetical protein CaO19.8432
Locus type CDS
Locus tag YALI0E25113g

Location

Species Yarrowia lipolytica Positions 3006792..3008694
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1903 (nuc.)
Previous locus YALI0E25091g Next locus YALI0E25135g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E25113g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E25113gYALI0E25113g_mRNA-001YALI0E25113g_CDS-001

Nucleotide sequence

 

>YALI0E25113g
ATGAGCACAATTCAAAAATACTCCGTCGTGACCCCGAGATCTCTGGGACTCGATGGTGTG
AACTTCAAGGGGTTCGAGCTCGACAGAATCTTTACTCCTGGCGCTAACCTCCAGGATATG
CCCATCACCACATGGGAACTGTTGCAGTTCCATATTCAACACGCCATTCTTGTGTTTCTA
CATGATACCATCGACTTCTGGTACCAGATTCACGGCGACGTAAATCACGCAGCCACCTCA
GTGTTGCTCATGGTGCGAACTTGGACTCTATGGCTCGTGGCACTGGCTCCGGCAAGACCT
CACAGAGGTAGCTCCAGAAATGACAACGCCAGACATAGGGGCCAACAGCTGCGACGTTAC
GGATCGGGATCCTCCTTCAGGTCCACAGACTCGTCCGACTCTTCTGCCACGACCCACCAT
CCCTCCTGGACCCACCAGCTGCGTACTTGGATCACAGGCTGTGTCGTGTCTGTATCAAGA
CGTCTGCCATTGGCCTCTCGACACCTCAGCTGGCTCTACGCTTCAGCCTCATCCGACCTC
GGTGCTCATCTCGGTCTGTTAGAGCAGCAAAAGTCTCCTCTGTTGATCAAACGGGAAGTG
TCCAAGCTAGGAACGGTGCCCAACAACGTAGGATTCGTCTTCGAGCTTCAGCCTCTTCTG
GAAGGACCACCAGAGCTCTCACTACCTAAACCCCTTCATCTGGCCACAGGAGAGGTCATA
TACCCCAGTCAGGATGAGGTCGACCAGGCACAGGGGGAGATTGACGCATACAGAGTCAAG
ATGGCTGTTCACAACGACCGAGAGCAGGCCCGCATCAAACAGAGTATTGCCAACATTGTC
GTGTGGTGCTCTGTCGTTGGGATCAAACGAGTCACTATCTACGAAGATTCGGGAGCGCTT
CTTCGAGACCACGACAGTCTCTGGGAAATCATCCAGCGACAACTCAAGGCTTACTATGGA
TGCACTGCCACAAACTGCGGATCTCGGCCAGATTTTGTGACCATTCACAGCCCTGGAATT
TCCCTTTCGAACAAGTATGACAACGACTCAGGCAAGCTGCACTCTCTTACTCCCAAAGGA
AGGTCAGACTCGGCCCAGCCCATGGCTACGTCTACTCCTATGGGATCCCCTAAGGATGAA
GCCATGACCGCCCTTTCTGCTTCTCCCGAGTCTGTGGAAATGTGGGGGGTTGATCTCACT
CTCATTTCCGGCACAGATGGTATGACCAAGGCTGCCCAGGTGAGTAACCTGTGGTTGAGT
CAGGCGACCGTCTCTCCTCCCGTTGTTGATGTTGATGCGGTTCATCAGTCTCTTCTGGAG
CTCACCAGAGGTCCAATTGAGCTCCTATATGTTGCCACCAAGCCCTACTGCTCCGTCAGA
CGGTTCCCTCAGTCCAGCATCAACGACTCGGTGCTTGTGTACGACAATCCTCGATGCACC
TTTAGTGAGTACGTGACTGGCTCTCTGCCTGCTGACTCTGTTGTGCGGCGAAGCCTACAG
AATATCTTTGGGCCCCCTTCCCAAAGCCGGGACGAGGGCGGTATGCTGTTTGAGTTCTTC
TACCGGGGTCTCGAGACATATGCCCGGGCCCTTTCGTCCGAGTTTCGGTCCATGGATCGG
CGACGTGCCCGACGGAAGCGACAACAGCGACAGAGGGAGAAGAAGGAAGATGGAGGCACA
CGCGGCTCGATCCGAGGTTCCCTTGGCCGAAACCGCAAGAAGGAAAGCGAGAAGGCTGCG
ACCGAGGATACCCAGTCTCTTCGAAGCTCGATCCGGGGCTCTTTCAGTCGAAAGGGAAAG
GAGAAGGAGGTTTGAACCAGCTTCTGCTCATCCAATTGCTTAACGTCATAATCACACGCA
TACAAGTATTAGTATTTAATCGTTAAAAATCTCATTGCTTACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E25113g_CDS-001

Protein length: 605 aa.
Product: Conserved hypothetical protein

>YALI0E25113g_CDS-001 MSTIQKYSVVTPRSLGLDGVNFKGFELDRIFTPGANLQDMPITTWELLQFHIQHAILVFL
HDTIDFWYQIHGDVNHAATSVLLMVRTWTLWLVALAPARPHRGSSRNDNARHRGQQLRRY
GSGSSFRSTDSSDSSATTHHPSWTHQLRTWITGCVVSVSRRLPLASRHLSWLYASASSDL
GAHLGLLEQQKSPLLIKREVSKLGTVPNNVGFVFELQPLLEGPPELSLPKPLHLATGEVI
YPSQDEVDQAQGEIDAYRVKMAVHNDREQARIKQSIANIVVWCSVVGIKRVTIYEDSGAL
LRDHDSLWEIIQRQLKAYYGCTATNCGSRPDFVTIHSPGISLSNKYDNDSGKLHSLTPKG
RSDSAQPMATSTPMGSPKDEAMTALSASPESVEMWGVDLTLISGTDGMTKAAQVSNLWLS
QATVSPPVVDVDAVHQSLLELTRGPIELLYVATKPYCSVRRFPQSSINDSVLVYDNPRCT
FSEYVTGSLPADSVVRRSLQNIFGPPSQSRDEGGMLFEFFYRGLETYARALSSEFRSMDR
RRARRKRQQRQREKKEDGGTRGSIRGSLGRNRKKESEKAATEDTQSLRSSIRGSFSRKGK
EKEV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG