YALI0E24915g

Overview

Description some similarities with uniprot|F0U984 Ajellomyces capsulatus HCEG_00396 conserved hypothetical protein
Locus type CDS
Locus tag YALI0E24915g

Location

Species Yarrowia lipolytica Positions 2975339..2977272
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1934 (nuc.)
Previous locus YALI0E24893g Next locus YALI0E24937g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E24915g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E24915gYALI0E24915g_mRNA-001YALI0E24915g_CDS-001

Nucleotide sequence

 

>YALI0E24915g
ATGTTCCGATCCAGCGACCGACCCCGGTTCAATCTCAAGCTCAAAATTATCGAGCTGGCC
AATGTGCCCCAACTGACAGGTGTGGCGACCGTGCGATGGCATCTCACCGACCATCGACGC
AACGACTTTCGAGGACGTACGGACGTCGCTCGAATCCGGAACCACCGAGCCGAATGGAAC
TACGAGACGTCCATGGAGTTCAGAATGCGAATAGACGATGATAAGATGCTGCACGGCTCG
TCCATCATGTTCGATGTGTTTGTGGAGTCCAGAAACGACCGTCAGAATGACAAGGAGATC
AACACCTCGGACAGAAACCACCTAGGACGAGTGGAGCTGAATCTCGCTGAATACGCCCAG
GACGAACCAATTACGCACAGATACTTGCTCCGAAAGTCCAAGGTCAACTCACTGCTCAAC
GTCTCCATCAACATGGAGCAGCTGCGAGGAGATACAGATTATATGATTCCTCCTCTCTCT
ACACAGCACATTTTCGGTCTCATGAGCCAGAAGGAGACATCTGATGCCGGCGGAGAGAGC
AAGACGTGCGAGTATCGAAGAGAATTCGCCCGAGGTTACTTTGTCTCGCCCCAGGGAGTG
TCTGTCAACAAGTGTATTGAGGACATTTTCCATGGAGGGGACGGATTTGGAGACGGAGGC
AAGGGTATGTTCTGGCAGCCTCCCAAGAAGAAGGGCTCCAAGAGGGATGCTGATATCAAG
GAGGAGCCTGAGAATTCTTCAGGTACCAACGGTAACCAGCCCAAGAAGACCAGTGCTTCT
TGCAAGCTCAAGGAGCGTCTCACCTTCCACAAGTCCCATCCTAACAACCCCCATACTCCG
CCCAAGCCCTCGCCGCTGCACGAATCTGTTGACCAGGAGCAGATGCAGGAGGAGAGTGCG
GGTATGCCTCGCTCTACTGAGGACAATGCTATGGGAGCCGGTCCCAAGTCCCAGGAACCT
GCAGGTGTCAATCTTGGAGGCAAGCGAGGTGCCGATCGAGTCTCAGACTTGTACAGAGGC
TTCCGGGACTTCCAGAGCACTCGAAGAGACCAGGTCAGACAGGGCAAGAGTCTGGAGAAC
TTTGTCATCAACAGCGCTCCTCCTGGTGTGACTCTGCCTCGAGCTACAGACATGCTCAAT
GGATACATCAGTTGGTACGTTGTGGACGAGAAGACCGGCCTTGAGGAGGAGGGCTCAAAT
CTCGAGGGCCAGAAGGTGGCACACAAGCACTATGTTGAGCAGAAGATGATGCACGATGAG
TTTATGAGAGAGCGAATTAACGTGCTGGCAGAGGAGAGCAAGGCTCGGGAGGAGGTGGAG
CGCTTCAACAAGTCTCATGGAATCGACAAGCCTGCATACGAGCCACTTCCTCCCAAGAGT
GAGGGCATTCTTCCCGAGATGGCACATGCTCAGGCTATTCAGCAGGAGGCAGAGGCTAAA
AAGAATGCACAGGAGGTTCCCGACCAGAACGGACACCAGGCGTCTTTGCCCATGGCCCCT
GCTGGGGCCAAACACTCTGAGCGAGCTCGTGCAGCCTACGAATTTGCACCCAAGACAGCT
GAGCCCAGCAACTCGGAAGTGGCTCCGGACGTGTCTGGCCAGCGAGACGCTCCTGTTGTC
AACAATGCACGGGAGCACATGGCCGAGATGCGACTGGACTCGGAGTTGGAATCAAATGAT
CACTCTGTGCAGCCCTCTGAGGTGACCGCCGCGCAGCAGCAGCAACATCAGCCGAAGCAA
GAGCCTTCTCAAGAGGCTAACGTGCAAGCAAGTTTTGATGTTAATTCTGCTGAGCGTTCC
AACACCAACCCGGAGATTCTCGCTCAGCCTTTGAAGGATAGTGCATTGCCGAAGTAGAAG
CAGCTTTGACTGATCGAAGACGTATGTAATTGAAGTATTTATTTATATCTCCACGCCATG
GAGTGGGTTTCTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E24915g_CDS-001

Protein length: 619 aa.
Product: Conserved hypothetical protein

>YALI0E24915g_CDS-001 MFRSSDRPRFNLKLKIIELANVPQLTGVATVRWHLTDHRRNDFRGRTDVARIRNHRAEWN
YETSMEFRMRIDDDKMLHGSSIMFDVFVESRNDRQNDKEINTSDRNHLGRVELNLAEYAQ
DEPITHRYLLRKSKVNSLLNVSINMEQLRGDTDYMIPPLSTQHIFGLMSQKETSDAGGES
KTCEYRREFARGYFVSPQGVSVNKCIEDIFHGGDGFGDGGKGMFWQPPKKKGSKRDADIK
EEPENSSGTNGNQPKKTSASCKLKERLTFHKSHPNNPHTPPKPSPLHESVDQEQMQEESA
GMPRSTEDNAMGAGPKSQEPAGVNLGGKRGADRVSDLYRGFRDFQSTRRDQVRQGKSLEN
FVINSAPPGVTLPRATDMLNGYISWYVVDEKTGLEEEGSNLEGQKVAHKHYVEQKMMHDE
FMRERINVLAEESKAREEVERFNKSHGIDKPAYEPLPPKSEGILPEMAHAQAIQQEAEAK
KNAQEVPDQNGHQASLPMAPAGAKHSERARAAYEFAPKTAEPSNSEVAPDVSGQRDAPVV
NNAREHMAEMRLDSELESNDHSVQPSEVTAAQQQQHQPKQEPSQEANVQASFDVNSAERS
NTNPEILAQPLKDSALPK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG