YALI0E24827g

Overview

Description weakly similar to uniprot|N4TSN8 Fusarium oxysporum f. sp. cubense FOC1_g10015374 THO complex subunit 3
Locus type CDS
Locus tag YALI0E24827g

Location

Species Yarrowia lipolytica Positions 2966097..2967568
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1472 (nuc.)
Previous locus YALI0E24805g Next locus YALI0E24849g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E24827g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E24827gYALI0E24827g_mRNA-001YALI0E24827g_CDS-001

Nucleotide sequence

 

>YALI0E24827g
ATGAGCAAACCAATCAACACTCAGCAATCGCTGCCAGTGGGATCTGCGCAGACCTACTTC
AAGAACCAGAGTGTTGTTGCTTACCAAGAAAAAGATTCAAAGCAGGGCGGCTCCTCTGCA
TCCTCATCTTCACAGTCATCGATCAAAAACATTGCCTGGAACAGTACAGGTACTCGAATT
GCCGTGGCATACAGCGATGCGCGAATCCGGGTATGGATTGCCGGAAATACCGAGGTCAAC
ACGTCGACAGAAATCCCATACTCCTCAAGCAAGTCTCAAAAGGCTGTAGTGGGCCTGGCA
TGGTCTCCCATCAGTCCCGATCAGCTCGCTACTTGCAGTCTCGACGGAACTCTCAAGGTG
TGGGACACAAGAACAAAAACGCTGCTTGCATCCGTGAACACCGGAGCCGACAATCTAGCC
TGCTTGTGGTCTCCCTGTGGTCGGTACATATCGGTGTTAAGACGAGACAATGCGATCCTG
TGGTACGCGCCTTCTTTCAACGGAGAAGTGGCTGAACCAGCACCCAGCACAAACATCGGA
GGACGTCAGAATGGAGGAAAGGACTCGCAAAGATCGCGAGGGGCACCCAAGATCGCCATT
GGTGCAATGGAAGCGTTTGGAAACCCCATTGCTGCATACAAGGAATCTCCCTACGAAATT
TTCGCGGCAACTTGGACAAACACAACTGCTGTCATGGCCATTACAATGGGAATTGGTGTG
GTGAAGCTGCTCAAGCTGAATCTCCAGACTGCTGCTACTTCTGAAGAGGTCGAAAAGGTG
GTTACTTCTTCCCAATCATTAAGCACGTCTAATGTGACCACTCTGTTTGAGCTTCTAGGA
CACACAACAGCCGCGAACTGTGTCAAACCTGATCCTCAAGGCCGTTATATTGCTGTGGGT
GGCAATGAAGGCATTGTTTCGTTGTGGGATACCAAAGAGTTGGTATGTGTCAAGACACTG
TCCAAGCACGACCAACCGGTCGTTTCTCTCGATTTTTCGCATGATGGAGACTACATTGCC
GTCGGGTATGACAACAACGATATCCCTGTGGACATTGTACATGTGGACACTGGAAAATTT
GTGCATGCTGTTTCTCGTCCGAGATGGACAGGGCTCCCAGTGGTGGCATGGAGCCCGGTG
AAGTACAACCTGGCATTTTCTGGGGACGTTGCGGGTCTGAATGTGATTACTGTAGGAGGT
AATAGGCCGAGTGGTTACTAGATGCCGAAATCGGGCTGGCATGTGCGACAAGAATCCTCT
AGTCATTAAAGCCAGATTTGAAAGAGAGGATGACACCGGAGCAACCAGCGAGCCCTCATA
CTGACAGATACTGATTAGCTATCGGAGCGTGCGACAGTCACTGGATTTCCCACACCCTCG
TCTGCAGCACAGAATATAAAACCAGTACAAGTACAAGTATAGGTACAAGTACAAGTGTAT
GTAGTATAATATTAGAACCGGATTGCATTCAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E24827g_CDS-001

Protein length: 407 aa.
Product: Conserved hypothetical protein

>YALI0E24827g_CDS-001 MSKPINTQQSLPVGSAQTYFKNQSVVAYQEKDSKQGGSSASSSSQSSIKNIAWNSTGTRI
AVAYSDARIRVWIAGNTEVNTSTEIPYSSSKSQKAVVGLAWSPISPDQLATCSLDGTLKV
WDTRTKTLLASVNTGADNLACLWSPCGRYISVLRRDNAILWYAPSFNGEVAEPAPSTNIG
GRQNGGKDSQRSRGAPKIAIGAMEAFGNPIAAYKESPYEIFAATWTNTTAVMAITMGIGV
VKLLKLNLQTAATSEEVEKVVTSSQSLSTSNVTTLFELLGHTTAANCVKPDPQGRYIAVG
GNEGIVSLWDTKELVCVKTLSKHDQPVVSLDFSHDGDYIAVGYDNNDIPVDIVHVDTGKF
VHAVSRPRWTGLPVVAWSPVKYNLAFSGDVAGLNVITVGGNRPSGY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG