YALI0E24739g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E24739g

Location

Species Yarrowia lipolytica Positions 2959075..2961684
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2610 (nuc.)
Previous locus YALI0E24717g Next locus YALI0E24761g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E24739g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E24739gYALI0E24739g_mRNA-001YALI0E24739g_CDS-001

Nucleotide sequence

 

>YALI0E24739g
ATGGGCAACACAAATTCAACTCTGCTCAATAGGGAGGAGGCAGAAAAGGCTCTCTTTGGA
GACGTCACTGCCCCTCCGACTACAACCATCAACCCGACACTAAAGACGCCCCCTTCACCC
GCTCTTTCTGTCGAACAACGATACGACTTCAACAACCGACTGACGCAACTGCAACAGCTG
ATCGAGTCCGACACCGCGCCCGCTTCGCTCAAAAAGGTGCCCCACCTCACCAAGGACCAA
CAGCGTATCCTGCTGCGAAAATACATGCATCGAGAGATCTTCACCGTCCATCAGGGCCCT
GCAGATCTCCCCTCAAATCCCCACGACGTCACCTTCAAGGAGACCTACCTGGTTCACCGA
GATTACAAACAACGATCTAAAAGCGCTCATGTACCTCGTTCGGAACCAGCCATTCGGTCT
CCTGTTGAAGAAGATGACATTCAAATTATTTGTGAACGACGCCTAGAACGTCCTGGAAGT
GACTCCCTCAGTGAAGCTTCCTTCACCTCCGCCTGCTCGGAGAATGCATACTCTGAACGA
GACTTTGAGCCTCCGCTTAGTCCACAGAGATCTCCTGACAAGCTGGACGTCAGGCCCATG
AGACGAGGTTCCACCCCAATCCCCGAGGCTCTTTTGCTGGGACAAGGACGAGGCCATACC
CAGAGCCCCATTCACACTCAGCAGCATCACGATCACGTGGCTCATCTTCAACATCATGAA
CTGCACGTTCATCAGCACTCAAGAGGATCGTCTGCCGCTTCTGGAGATAGTCTGAATGTT
CCCAAGCAGCGAGGACGAAAACAGAAGCGGTCCTCTGACCCCAAACCGGATCTCAGGCCC
CGATCAAAGTCCGATGGACACGCTCTGGCAGCATCCATGGTCAGACTCACACCCGACGAA
CACCTACTTGCATACCCGTCTCGAGAAGCGTCACCCGACCGATTTGACGGCACTTGGGGC
TCCCCTGTTCCCCAGCAGCATGCTCAATTCCCTCACGAGCCTCATCATCATTCGCATTTG
GCTCATGAGATTCCCATTCTGCCCCCTCCCATGGAGTTTGAGCGGTCTAGAGCACGAGCC
AAGGAACTCAAGCAGAAGCAGACAGACGAGTTTGTCCAGGAGAGTAACAACGAGCCCTCT
GAGTCTCTTCCAATGTCCAAGACCATGCCCACCATTACTCTTCCCTCCATGCCCTCTTTG
CCTACAAGCATGAGTCTTCCCAAACGACACTCTATGCCTGTGCAGGCTCCCAAAGCTACA
GCTTCGGACATTTTTGAGATTCCAGCCGTGCCCACTACTCCTGCCAAAGAAAAGTCAGAG
AAGTTGTCGCTCTTCAAACGTCTGGCTCATCGACGTCGTTCCATGACCGAAAAGGCTCCC
CCGCCCCTCTTAGTCGACGAAAAAGATCTGGATCTGACTCTCACGATCCCTGCCATTCCC
ATTTCCGCCCGTAAGATGACCTCCGAGCCTGAAGACTCGCCCCTGGTAGCCAACAGACTA
TCGTCTATCACTCGTCCCAAGACCCGGCCGGCAGCTCAGCCCAGAGCCAAGAGCATGTAT
GTCCCTCGAGAGACGCCGGTCGAGTCTCCTGATGGAGCTTACCCGTTCCAAGCTCGTGGT
AATGAGATGTCCAAGCACATCAACGACCTCTCCAACGCGCCCTGGAGTCTCTCTAATGTT
CCCCAGCTGTCTCCCGAGCGATTTGTGCAGAAGCGAACTGACACTGCTGGCAGTTTTGGT
TCCATGGAGGAACTCAAGCGGACGAACACTGTCACCAACGGTGGTCACATTCTGGACGCT
GGTATCCCTCCCAAAGTGCCTACTCATAGATCCCTGACCATCATGTCTCAGAGCAGTGGC
ACTTCTTCCGATGACTATTTTAGCGTTGGTTCACGGTCTCCTGAACTTTCTTATTCTTCG
GTTATCGCTCACTCTCAGCAGCAGCAAGGAGGATCCTCTACTCCTTCCCCTCCTCACTCT
ACGGACATTTACACTCGAAAGTGCTCGTACCGACGGCCCAAGCTTCAGACTCGAAAGACG
GAGCCGGCTCCGATCACCGTGTCTACAGTGGCAGAGGTCGAAACGCCACCTGTATCACCT
GAAGACGATGCTTCGTACGAGCAGGAGATTGAGGAGGAGATTGCCGCACGACAGTTCATG
CTGTGTGGCTACAAGAAGTCGTCAACCAAGCTGCAGGTTGTTAACTGGCAGAAGGACGCG
TTCATGAATTCTTCCACCACTCTCGGTGACCTTTCCCACACAGGAACAGACAATTCCCCC
CCTTCTGTGCCTCCTCCCATGCCCTTCATGATGCAAAACAAGCAGCGTCAGACTCCCCGA
AAGTACCACAAGAAGGGTGGCTCAGATGCCTTCTCTTTTGAAGAGGAGTTTGCACAGGAA
CAAAAAGAACAGAAAAAAGAGCAGCCTCGGCTTCCTGAGCCTCAGGTATCTGCTGCTCAA
CAGACTTACCTCGATCTGATCAACAATGATGACATGTGGGACGATCAGGGTAACGATTAT
TTCAATTTCTGCAATTAGCCGCAACCGTGGTGACGGCGAAACAGTATAGTATTTATATAG
CATATGCATTTTATCCCTACGTTGTCTTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E24739g_CDS-001

Protein length: 846 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E24739g_CDS-001 MGNTNSTLLNREEAEKALFGDVTAPPTTTINPTLKTPPSPALSVEQRYDFNNRLTQLQQL
IESDTAPASLKKVPHLTKDQQRILLRKYMHREIFTVHQGPADLPSNPHDVTFKETYLVHR
DYKQRSKSAHVPRSEPAIRSPVEEDDIQIICERRLERPGSDSLSEASFTSACSENAYSER
DFEPPLSPQRSPDKLDVRPMRRGSTPIPEALLLGQGRGHTQSPIHTQQHHDHVAHLQHHE
LHVHQHSRGSSAASGDSLNVPKQRGRKQKRSSDPKPDLRPRSKSDGHALAASMVRLTPDE
HLLAYPSREASPDRFDGTWGSPVPQQHAQFPHEPHHHSHLAHEIPILPPPMEFERSRARA
KELKQKQTDEFVQESNNEPSESLPMSKTMPTITLPSMPSLPTSMSLPKRHSMPVQAPKAT
ASDIFEIPAVPTTPAKEKSEKLSLFKRLAHRRRSMTEKAPPPLLVDEKDLDLTLTIPAIP
ISARKMTSEPEDSPLVANRLSSITRPKTRPAAQPRAKSMYVPRETPVESPDGAYPFQARG
NEMSKHINDLSNAPWSLSNVPQLSPERFVQKRTDTAGSFGSMEELKRTNTVTNGGHILDA
GIPPKVPTHRSLTIMSQSSGTSSDDYFSVGSRSPELSYSSVIAHSQQQQGGSSTPSPPHS
TDIYTRKCSYRRPKLQTRKTEPAPITVSTVAEVETPPVSPEDDASYEQEIEEEIAARQFM
LCGYKKSSTKLQVVNWQKDAFMNSSTTLGDLSHTGTDNSPPSVPPPMPFMMQNKQRQTPR
KYHKKGGSDAFSFEEEFAQEQKEQKKEQPRLPEPQVSAAQQTYLDLINNDDMWDDQGNDY
FNFCN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG