YALI0E24717g

Overview

Description similar to uniprot|Q08641 Saccharomyces cerevisiae YOR239W ABP140 Nonessential protein that binds actin filaments and localizes to actin patches and cables
Locus type CDS
Locus tag YALI0E24717g

Location

Species Yarrowia lipolytica Positions 2955845..2956958
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1114 (nuc.)
Previous locus YALI0E24695g Next locus YALI0E24739g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E24717g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E24717gYALI0E24717g_mRNA-001YALI0E24717g_CDS-001

Nucleotide sequence

 

>YALI0E24717g
ATGCAGACTGATCTAACCACCACCAACATCACCCGTCTCACCATGTCGACTGAAGAAAGA
GACGGATCTCCCGCAGAGGTGCACTCTGAAGCTCCTTCTGAAACTGGAACACCCGAGCCC
GATTGGTCGGTCAGCCGAGAGGCCCGAGGAGACCGGCCCTACAAGTTTGGACAGCGATAT
CTCAAGGACGAGGAGTCTGTGTGGGATCACAATGCCTGGGATCACGTGGAATGGGGCGAG
GAACAGCGTGTAGAAGCTGAGGAGAAGCTCGCCAAGCAGAAGGAGGCACCCGTGACGGAG
TTCGACAAGAAGGCATACATGGCTGATCCAGCCCGATACTGGGATCTTTTCTACAAGAAC
AACAAGGAGAACTTTTTCAAGGACCGAAAGTGGCTGCGAGTCGAGTTCCCCGCTCTATAC
GAGGCTACCAAGGCCGACGCCGGTCCTGTGTCCATTCTGGAGGTTGGCTGTGGAGCCGGC
AACACCATGTTCCCTGTTCTAGGTGCCAACGAGAACCCCGATCTGCGTATTTTCGGCTGC
GATTTTTCCCGAAGAGCCGTTGAAATCGTCCGAGAGAGCGACCAATTTGACCCCAAACAC
GCCGGCGCTTCTGTGTGGGATCTGGCTGACCCTGAAGGCAACCTGCCCGAGGGTATTGAG
GAACACTCTGTGGACATTGTGGTAATGATCTTTGTTTTCTCTGCTCTGGCACCTGAGCAG
TGGAAACAGGCTATGAAGAACGTCGACCGGCTTCTCAAGCCCGGGGGCCGAATCCTGTTC
CGAGACTACGGACGGTACGATCTCACACAGCTGCGGTTCAAGAAGGGCCGTTTGCTCGAC
GAAAACTTTTACATTCGAGGTGACGGAACTCGAGTTTACTTCTTTACCGAGGAGGAACTG
CATGATATTTTCGGAGAGCGATTCGAAGTTGTCAAGGTCGGTACTGACCGAAGACTCATG
GTCAACAGACAGAGACGGATTAAAATGTACCGAATTTGGCTGCAGGCGGAGTTTAGAAAG
AAGGAGTAGACGAGCGGAGAAAGTCTACTGAGCGACATGAGACGGGTACTTGATGAGTAT
GAGTAATGTAATACTAATGGTTATGGATAGCAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E24717g_CDS-001

Protein length: 343 aa.
Product: AdoMet-dependent tRNA methyltransferase and actin binding protein, putative

>YALI0E24717g_CDS-001 MQTDLTTTNITRLTMSTEERDGSPAEVHSEAPSETGTPEPDWSVSREARGDRPYKFGQRY
LKDEESVWDHNAWDHVEWGEEQRVEAEEKLAKQKEAPVTEFDKKAYMADPARYWDLFYKN
NKENFFKDRKWLRVEFPALYEATKADAGPVSILEVGCGAGNTMFPVLGANENPDLRIFGC
DFSRRAVEIVRESDQFDPKHAGASVWDLADPEGNLPEGIEEHSVDIVVMIFVFSALAPEQ
WKQAMKNVDRLLKPGGRILFRDYGRYDLTQLRFKKGRLLDENFYIRGDGTRVYFFTEEEL
HDIFGERFEVVKVGTDRRLMVNRQRRIKMYRIWLQAEFRKKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG