YALI0E24035g

Overview

Description similar to uniprot|P29056 Saccharomyces cerevisiae YGR246c BRF1 TFIIIB subunit, 70 kD
Locus type CDS
Locus tag YALI0E24035g

Location

Species Yarrowia lipolytica Positions 2854490..2856092
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1603 (nuc.)
Previous locus YALI0E24013g Next locus YALI0E24057g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E24035g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E24035gYALI0E24035g_mRNA-001YALI0E24035g_CDS-001

Nucleotide sequence

 

>YALI0E24035g
ATGAAGTGCCCCAGATGTGGATCGACATCGATCAAGCGAGACGGAAACGACTCGTCCTGT
GCCAACTGTGGTGTTGTCGTTGACGACGCGCCTATTGTGTCCGAGGTGACCTTCGGAGAG
TCGTCTTCTGGAGCTGCCGTGGTGCACGGTTCGTTTGTGGGAGCCGACCAGTCCGGTATC
CGAAACAACAACTTCCACGGCGAGTCACGCGAGCTGACTTTACAGAAGGGCAAGAACCGA
ATCACAGCGCTCGCACACGCCATGGATATCCCCCAACATATCATTGAAAAGGCCCATCGG
TATTTTGTTCTAGCCGTCACCAAGAACTTTGTCAAGGGCCGACGGTCACAATACGTGGTT
TCGGCGTGTCTGTACGTTGCCTGCAGACGAGAACTGCGACATGAAATGCTTATTGATTTC
GCAGACAAGCTATTTTGCAACGTGTTTGCTATCGGAACCACTTACCTGCAACTGCTCAAG
ACATTGGACATCAAGAACCTGCCACTGATCGACCCGAGCATCTACATTCAGCGGTTTGCG
TCCAAGCTCGACTTTGACAACGCAAAAAACGTGCGAAACGACGCGGTTCGACTTGTTCAG
CGTATGGGACGTGACTATCTGGTTGAGGGTCGTCGTCCTGCCGGTATCGCCGCCGCCGCA
TTGCTGCTAGCAGCTCGAATGAACAACCAGCGTCGGTCCAAGACGCAGATTGCATTTTAC
GCCAAGGTCGCGGAAGAAACGCTTCAACGACGTCTGGACGAGTTCAGACACACCGAGGCT
GGTCGCCAGACCATCTCAGTGTTCCGAATGACCAACATCGAGTCGCAGTCGGACCCGCCC
TCGTACCAGAAGCATCGAAAGCGGGAGCAGGAAGGTATTGAGGAGAAGGTTCAGGACGAG
ATTGACGCGGAGATGGAGGAGATGATGGCGCAGATGGTGGAGAAGAACGAAAACCCGGAG
GAGCGGGCCAAGGAGGCGCTATTTCTGGAAGACACTCCGCAGGAAAAGGCAGAGAGAACC
GTTCAGAACAGAGCCCAGTATATCATTGAATACGAGCGAGAACGGCGTCGAATGCTCAAC
GAGGAGGCTAACAATGCCGCCACAGAGGCACTTCTGGCCATGAAAACACCCCATGAGCAG
ATGATGGAGGATCAGCAGACAGCCGAGAAGGAAGGAGGCGACGCCAGACCTCCAGTGGTC
GAGTCGTTATCGGATCTCGACGACGATCCCGAAATCGACTCCATTCTGCTCAACGACGAG
GAGCGTAACATCAAGGAGGCCGTCTGGACCACCGTCAACATGGAGTACCTGCAGGAACAG
GAAACCAAGTTGTTGAAGATCGAGGCCGACAAGGCCGCTGGAGTGTATAAGGAGCCCAAG
AAGCGAAAGCGACAGAAGCAAAAGGATGGCGAGAAGCCTGCTCCTCCCAAGGACGCGGCC
GAGAGTACTAAACAGATGGTGCAGCAGCGAGCTCCTTCAAAGAAGATCAACTACGAAAAG
TTCTCCGGACTGTGGAGCAAGCGAAAGAAGTTGACTTGATCAGAGGAAAAAAAGTGAGAC
GAGAATTGCATATAGCTAACATTAAATTATTGTGTATTTGTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E24035g_CDS-001

Protein length: 513 aa.
Product: TFIIIB B-related factor, putative

>YALI0E24035g_CDS-001 MKCPRCGSTSIKRDGNDSSCANCGVVVDDAPIVSEVTFGESSSGAAVVHGSFVGADQSGI
RNNNFHGESRELTLQKGKNRITALAHAMDIPQHIIEKAHRYFVLAVTKNFVKGRRSQYVV
SACLYVACRRELRHEMLIDFADKLFCNVFAIGTTYLQLLKTLDIKNLPLIDPSIYIQRFA
SKLDFDNAKNVRNDAVRLVQRMGRDYLVEGRRPAGIAAAALLLAARMNNQRRSKTQIAFY
AKVAEETLQRRLDEFRHTEAGRQTISVFRMTNIESQSDPPSYQKHRKREQEGIEEKVQDE
IDAEMEEMMAQMVEKNENPEERAKEALFLEDTPQEKAERTVQNRAQYIIEYERERRRMLN
EEANNAATEALLAMKTPHEQMMEDQQTAEKEGGDARPPVVESLSDLDDDPEIDSILLNDE
ERNIKEAVWTTVNMEYLQEQETKLLKIEADKAAGVYKEPKKRKRQKQKDGEKPAPPKDAA
ESTKQMVQQRAPSKKINYEKFSGLWSKRKKLT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG