YALI0E24013g - LSC1

Overview

Description uniprot|Q6C4S9 Yarrowia lipolytica YALI0E24013g LSC1 Succinyl-CoA ligase alpha subunit, putative
Locus type CDS
Gene name LSC1
Locus tag YALI0E24013g

Location

Species Yarrowia lipolytica Positions 2850788..2852616
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1829 (nuc.)
Previous locus YALI0E23991g Next locus YALI0E24035g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E24013g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E24013gYALI0E24013g_mRNA-001YALI0E24013g_CDS-001

Nucleotide sequence

 

>YALI0E24013g
ATGTACTCCGCCATTCGAGCCACCCGTATGGGTGTCAGGTGAGTAGAGCAATGGGCAATG
GGCAATTGCCAGAGACAAGACGACTGGAACGGGCGCGCCACCACATCCACAAACACACAC
AAACACACAGTCGTCAACTGTGCACGTTTGGTCACAACTCCACCACACAGGTGCTGCAAA
CTCGACGGAAAAGAAGAGGGGGCCCGCACCCGTCACAGAACCACCCGGACATGTCTCCAC
GTGGGTAATTGAGCGTGTACGAGCGTCGAGAAGCCCGGATTGCCGTGTCGGGGGCTCTGA
TCGCGCCCTCTATCGTTGGCCTTTCCACGGCTCTTTTTTTTACTCATGCGCTGTTAATTC
CGGAATTTGACGTAACTTTGAGTGGTCGGAAAATCACGGACACTACTGCACGCGTGGGAC
AGCGTCTCCAGACCTCGACGGCGAGCGGTGCAATGGCCATGACAGCTCCACGGGTTGAGT
GCACCGTCGCCAGTCGCCCCCTCAGCAGTGCCGTCTGCAGGTAAATTAACCGAGGCTGCA
TGTGGTTGTTGATATTCCGGAATAATCCGGTGCATGCAGGACAGAGCGACGACATTGCAA
CAAAACAGACAACACCGTATGAATGTGACCAGCAATTGAGCTGTAAAATAGACCATCTCC
TTCCCCCCACTAACACAGATCCTTCTCCACTTCTGCCCCCGTCCGAAGCTACGCTGATAC
CGTCAACAACCTGAAGATCAACTCCAACACCAAGGTGCTCTTCCAGGGCTTCACCGGAAA
GCAGGGAACCTTCCACGCCCAGCAGGCCATCGACTACGGCACCAAGGTCGTTGGAGGAAC
CAACCCCAAGAAGGCCGGCCAGAGCCATCTCGGTCTCCCCATCTTCGGCACCGTTGCCGA
GGCCATGAAGGAGACTGGATGTGACGCCTCCGCCATCTTCGTCCCCCCTCCTCTTGCCGC
CGCCTCTATCGAGGAGGCCATTGAGGCCGAGCTGCCCCTCGTTGTCTGTATCACTGAGGG
TATCCCCCAGCACGACATGATCCGAGTGGTCGACATGCTCAAGACCCAGTCCAAGACCCG
ACTTGTCGGTCCCAACTGCCCCGGTATCATTGCTCCCGGCCAGTGCAAGATCGGTATCAT
GCCCTCTTCCATCCACAAGCGAGGCCGAATCGGTGTTGTGTCCCGATCCGGAACCCTTAC
TTACGAGGCCGTCAACCAGACCACCCAGGTCGGTCTCGGCCAGTCTCTCGTTGTCGGTAT
CGGAGGTGACCCCTTTGCCGGTACCAACTTCATCGACTGCCTCAAGGTTTTCCTCGAGGA
CGAGAACACCGACGGTATCATCATGATCGGTGAGATTGGAGGTACCGCCGAGGAGGAGGC
CGCTGACTTCCTCAAGCAGTACAACCAGACCCGAGAGGTCCCCAAGCCCGTCTGCTCCTT
CATTGCCGGTGTGTCTGCTCCTCCCGGACGACGAATGGGCCACGCTGGAGCCATCATCTC
CGGTGGTAAGGGTGGTGCCGGCTCCAAGATCTCTGCTCTTGAGGCCGCTGGTGTTGCCGT
CGAGCCTTCTCCCGCCCGACTCGGTAAGACTCTTTACGACGAGTTTGTCAAGCGAGACCT
GCTCTAGACTGTTAGTTAATTGATAGATGTTATTAGATGAGCGGGTGGTGGCCCAACCAG
CACTCTGACGAGAGTGAACGTAGCAACGGTCTGCTCTAGTGATCATAAGACTTCCACAGA
AGAAGCCATTGAGTTGTAGTAAACGGGTACCAGTGCGATAGTAGGCTGTTGTTCGTATTT
TAGACACAATACTTGAGAACCCTACCTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E24013g_CDS-001

Protein length: 329 aa.
Product: Succinyl-CoA ligase alpha subunit, putative
Gene: LSC1

>YALI0E24013g_CDS-001 MYSAIRATRMGVRSFSTSAPVRSYADTVNNLKINSNTKVLFQGFTGKQGTFHAQQAIDYG
TKVVGGTNPKKAGQSHLGLPIFGTVAEAMKETGCDASAIFVPPPLAAASIEEAIEAELPL
VVCITEGIPQHDMIRVVDMLKTQSKTRLVGPNCPGIIAPGQCKIGIMPSSIHKRGRIGVV
SRSGTLTYEAVNQTTQVGLGQSLVVGIGGDPFAGTNFIDCLKVFLEDENTDGIIMIGEIG
GTAEEEAADFLKQYNQTREVPKPVCSFIAGVSAPPGRRMGHAGAIISGGKGGAGSKISAL
EAAGVAVEPSPARLGKTLYDEFVKRDLL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG