YALI0E23562g

Overview

Description highly similar to uniprot|P14120 Saccharomyces cerevisiae YGL030W RPL30 Protein component of the large (60S) ribosomal subunit, has similarity to rat L30 ribosomal protein
Locus type CDS
Locus tag YALI0E23562g

Location

Species Yarrowia lipolytica Positions 2781259..2781815
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 557 (nuc.)
Previous locus YALI0E23540g Next locus YALI0E23584g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E23562g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E23562gYALI0E23562g_mRNA-001YALI0E23562g_CDS-001

Nucleotide sequence

 

>YALI0E23562g
ATGGTAAGTTATCCAGCAAACAGATCCAAGATCTTGAGCTGAGATGGGAGTGCTAGTGAA
TGATTTTCGGTGACGTTGCGTTTGTCCGTCATGACGGTGATCGCAACATCGACCTGTAAC
TCTTCACCATGCAACCACCGTGTCTACAAGACTCATTCTAACCCAGGCCCCCAAGTCTAA
GAAGTCCGGCGACAACGTCAACGCCAAGCTCGGTCTTGCTATCAAGTCCGGAAAGTACAC
CCTCGGTTACAAGTCCACCATCAAGGCTCTCCGACAGGGCAAGGCCAAGCTTGTCATCAT
TGCTGGCAACACCCCTGCTCTGCGAAAGTCCGAGATTGAGTACTACGCCATGCTCGCCAA
GTGCACCGTCCACCACTTCCAGGGCGGCAACAACGAGCTCGGTACCTCTTGTGGTCGACT
CTTCCGAGTTGGCGCCGTCACCATCATGGATGCCGGTGACTCCGACATTCTGACTGCTGA
GCTTTCTTAAGCAGTTTGAAGACCCCCAAAATAAAAATTAATGTACTTTAGTGCCGTTAT
TTATTACTTTTTGATTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E23562g_CDS-001

Protein length: 109 aa.
Product: Ribosomal 60S subunit protein L30, putative

>YALI0E23562g_CDS-001 MAPKSKKSGDNVNAKLGLAIKSGKYTLGYKSTIKALRQGKAKLVIIAGNTPALRKSEIEY
YAMLAKCTVHHFQGGNNELGTSCGRLFRVGAVTIMDAGDSDILTAELS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG