YALI0E23540g

Overview

Description weakly similar to uniprot|P22217 Saccharomyces cerevisiae YLR043C (ohnolog of YGR209C) TRX1 thioredoxin I
Locus type CDS
Locus tag YALI0E23540g

Location

Species Yarrowia lipolytica Positions 2772761..2773649
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 889 (nuc.)
Previous locus YALI0E23518g Next locus YALI0E23562g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E23540g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E23540gYALI0E23540g_mRNA-001YALI0E23540g_CDS-001

Nucleotide sequence

 

>YALI0E23540g
ATGAAAGAACTCACCTCCACAGACGAGTACTTCAAGGCCATCCACCCCGCCACGGTGTCG
GTGGTGGACTTCTACGCCGACTGGTGCGGGCCATGCAAGGCGGTGGCGCCGGGCTACGCC
AAGCTGGCCGAGCAATACAAAAACCAGGCGTCGTTCTACAAGGTCAACGTGGACAACAAC
CAGGGCGCATCGTCGCACGCCGGAGTGTCTGCCATGCCCACGTTTGGGGTGTTCAAGAGC
GGCAAGCTTCTGGAGACGGTGCGGGGCGCCGATCTAGGGGCCGTGGAGCGACTGATCAAG
AAACACGGCGCTGCGGCCAAACCCGTCTACGTGACCCAGGGCCATGTGCTGGGCCAGAAA
CCCATGTCCGCCCAGGCCACGTCGTCGATTCGACACGTGATCCAGGCCATTCTCGCCTAC
TTTGTCTCACTGTTTTCGCTGCTGCCCCTGGAGAGCGCCACGAGCTTTGTCGAGGCTGCG
CAGGCCCGACAGAAGGGTCGCGAGATGCAGCGCCAGCGGGCTCCTCCCCGGGGGTTCGAT
GGCTCGGATCGTTTCTCTTTCAACAAGAAGGAGAGTCCGGCAAGCACCTGCAGTAGTTAG
CCGATACTGATGTTAACGAATGCAATCTGAGTAACACGGAGACTGACAGAAGTGCGGTAC
AAAAAAGTACAACTCTGCTACAAGTAGTTGTCAGCAACCCACCTCGGTAACGGTCAACTC
TTTGCCAACTCCGAACCGGTCAACCCGTCCGACCGACCCAACCGGTGTATCCAACCCCGG
TCAACCGCCCGATCTACCCAACCCCTATAATCTAACGTGTTCTTATTCAGTGTAGCTCGT
GCCCGATAGCACCGACGTCACGATCGTGGCTGTGCGCAGGTGCATGACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E23540g_CDS-001

Protein length: 200 aa.
Product: Conserved hypothetical protein

>YALI0E23540g_CDS-001 MKELTSTDEYFKAIHPATVSVVDFYADWCGPCKAVAPGYAKLAEQYKNQASFYKVNVDNN
QGASSHAGVSAMPTFGVFKSGKLLETVRGADLGAVERLIKKHGAAAKPVYVTQGHVLGQK
PMSAQATSSIRHVIQAILAYFVSLFSLLPLESATSFVEAAQARQKGREMQRQRAPPRGFD
GSDRFSFNKKESPASTCSS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG