YALI0E23287g

Overview

Description similar to uniprot|P49374 Kluyveromyces lactis High- affinity glucose transporter
Locus type CDS
Locus tag YALI0E23287g

Location

Species Yarrowia lipolytica Positions 2739452..2741134
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1683 (nuc.)
Previous locus YALI0E23265g Next locus YALI0E23320g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E23287g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E23287gYALI0E23287g_mRNA-001YALI0E23287g_CDS-001

Nucleotide sequence

 

>YALI0E23287g
CAACTTCTTGTACACCTCTCAACTCACAATGTACAAGGTCCACAACCCCTACCTTACGGC
GGCGGTAGCCACCATGGGCGGTATGCTCTTTGGTTTCGATATCTCGTCGGTTTCCGCCTT
TGTCGGCGAAGACCAGTACATGCAGTACTTTGGTCACCCCACCTCCATCCAGCAGGGAGG
TATCACAGCCTCCATGGCCGGCGGCTCCATGCTGTCGTGTTCGTTTGCCGGTTTCATTTC
TGACCGAATCGGCCGAAAGCCCACTATCCAGATTGCTGCTGCCTGGTGGATAGTCGGCGC
GGCCATTCAGTGCTCAGCCCAGAACATGGGCCAGCTGATTGCCGGCCGTGTCATCTCCGG
TATTGGTATTGGTATTGGTTCTTCTCAGATTCCTGTCTTCATTTCCGAGCTGTCCCCCAA
GAAGATTCGAGGTCGGCTGGTCGGCTGTTTCCAGTGGGCCGTCACCTGGGGTATTCTGAT
CATGTTCTACATCTCCTTTGGTTGCTCGTACATCAAGGGCCCTGCTTCTTTCCGTCTGGC
CTGGGGTATCCAGATGATTCCCGGAGCCATGCTGGCGTTTGGAATGATGTTCCTGGACGA
GTCGCCTCGATGGCTGGCATCCAAGGACCGTTGGGAAGAGGCCATCCAGATCATCCGATC
TGTCAACGGCAACTACGGTACCGAGGAGGACATTCTTATGGAGATTGAAGACTTGCGAGA
AGTGGTGCGAATCGACCACGAGTCCAAGACCGTCATGGTGTGGGATCTGTTCCGAAAGGA
CTCCATCAACCGAACCATGGTGGGTATCTGGGCCCAGATCTGGCAGCAGCTCACCGGAAT
GAACGTCATGATGTACTACGTGGTCATCATCTTCAAGATGGCCGGCTACTCCGGAAAGTC
TTCTGTTCTTGTCTCCTCCTCTATCCAGTACATTATCAACGTGGTCATGACCATTCCTGC
CCTGCTCTTCATTGATAAGATTGGACGACGACCTCTGCTCATTGTCGGATGTCTCTTCAT
GATGACCTGGCTGTTTGCCGTCGGAGGAATGCTCGGTGCTTACGGTACCCAGATGCCCGG
AGGTCTGCCTGCCAACCCCGAAAAGAACATTGCTGCCGACCCCTACACCACCATCTTCAT
CGACGACAACCACAAGACTGCGCGAAAGGCCATCATTGCCTGCTGCTATCTGTTTGTGGC
CTCGTTTGCGCCCACCTGGGGTCCCGGTATCTGGCTCTACTGTTCGGAAATCTTCCCCAA
CAAGCAGCGAGCTATGGCCAACTCCATCACCGCTGGAGCCAACTGGGCTTTCAACTTTGC
TCTGGCCATGTTTGTGCCTACCGCCTTCAAGAACATCAACTGGAAGACGTACATCATCTT
CGGTGTCTTCTGTGTCGTCATGTGCATCCACGTCTTCCTGCTCTTCCCCGAGACCAAGGG
TAAGACTCTGGAGGAGATTGACATGATGTGGGACGCCAAGGTGCCTGCGTGGCGAACCGC
CTCCTGGGTGCCCGACCACATGCCTTCTCGATACGCCGAGAAGGATCTGGACGAGAAGCC
CATGGACGAGCTTGCTGAGGAGCCTTCTCACGAGGAGGACCCTCATCCTCAGTACACCGA
GACTGTTTAATCAGTGGCTGATTATATATATTATTTAATGACTAATGATTGTTTCTGATT
GAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E23287g_CDS-001

Protein length: 534 aa.
Product: High-affinity glucose transporter, putative

>YALI0E23287g_CDS-001 MYKVHNPYLTAAVATMGGMLFGFDISSVSAFVGEDQYMQYFGHPTSIQQGGITASMAGGS
MLSCSFAGFISDRIGRKPTIQIAAAWWIVGAAIQCSAQNMGQLIAGRVISGIGIGIGSSQ
IPVFISELSPKKIRGRLVGCFQWAVTWGILIMFYISFGCSYIKGPASFRLAWGIQMIPGA
MLAFGMMFLDESPRWLASKDRWEEAIQIIRSVNGNYGTEEDILMEIEDLREVVRIDHESK
TVMVWDLFRKDSINRTMVGIWAQIWQQLTGMNVMMYYVVIIFKMAGYSGKSSVLVSSSIQ
YIINVVMTIPALLFIDKIGRRPLLIVGCLFMMTWLFAVGGMLGAYGTQMPGGLPANPEKN
IAADPYTTIFIDDNHKTARKAIIACCYLFVASFAPTWGPGIWLYCSEIFPNKQRAMANSI
TAGANWAFNFALAMFVPTAFKNINWKTYIIFGVFCVVMCIHVFLLFPETKGKTLEEIDMM
WDAKVPAWRTASWVPDHMPSRYAEKDLDEKPMDELAEEPSHEEDPHPQYTETV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG