YALI0E23265g

Overview

Description similar to uniprot|P40066 Saccharomyces cerevisiae YER107c GLE2 required for nuclear pore complex structure and function
Locus type CDS
Locus tag YALI0E23265g

Location

Species Yarrowia lipolytica Positions 2735232..2736466
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1235 (nuc.)
Previous locus YALI0E23243g Next locus YALI0E23287g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E23265g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E23265gYALI0E23265g_mRNA-001YALI0E23265g_CDS-001

Nucleotide sequence

 

>YALI0E23265g
ATGTCTAGCGTGTTTGGAAGCGCAAGAACTACTTCGGGTTTCGGCGGCCTGACCCAAACG
TCCTCGGCCGGCACGGTCCAGGATATGGCCAATGACCCCACTCTAGCCAATCCGCCGGAA
GACTCTGTGTCCGACATTTGCTTCTCTCCACAGGCCGAGTTTCTGTCGGTGGCGTCGTGG
GACAAAAAGGTGCGCATCTACGAGGTGTCTCCGCAGGGCCAGTCAAGGGGAGTGGCTCTC
TACGACCACCAGGCGCCAGTGCTGTCCACCCACTGGTCTTTGGACGGAACCAAGGTGGCG
TCTGGAGGCTGTGATAACGCCGTGAGGGTGTTTGACATGCAATCGCAACAGGCGCAGCAG
GTCGGCCAGCACGAGTCGTCCGTCCGATGCGTGCGATTCGTCGCCGCTGGACCTTCAGAC
ACACCTATTCTGGCATCCGCAGGATGGGACAAGAAGCTGCACTACTGGGACCTGCGAACT
CCCAACCCCGTGTCCACCATTGCGCTGCCCGAGCGGGCGTACTCCATGGACACGTCCAAG
CAGCTGCTTGTTGTGGCGACCGCTGAGCGACACATTCTGGCCATCAACCTCAGCAACCCC
GGAGCCGTGGCCAAGACGCTGCAGTCGTCTCTCAAGTTCCAGACCCGTGTGGTCTCCTGC
TGGCCCGCCGGCGACGGCTTTGCCGTGGGCTCTATCGAGGGCCGATGCGGCATTCAGTAC
GTGGACGACACACAGGCTAAGAACAAGAACTTCTCGTTCAAGTGCCACCGACAGACCCCC
AACCCGTCAAAGAACGAGGTCGACATCTACGCCGTCAACGCCATCTCGTTCCATCCTCAG
GAGGGTACTTTCTGCACGGCCGGTGCAGATGGATCGCTCACCTTCTGGGACAAGGACTCC
CGCCACAGACTCAAGGGCTACCCACAACTAGGATGCACCATTCCCGCCACAGCCTTCAAC
CGCGACGGCTCTATATTCGCGTACGCACAGTCGTACGACTGGAGCAAGGGCCACTCATAT
AACAACAAGGACATCCCCCACACGGTGCGGTTCCACCAGACAAAGGCCGAGGAGGTTAAG
GCCAAGCCCAAGCGAAGATAGAGAGATATATACTCTTAAGCCACCATACAGGGTGGACCA
TCCAGCAATCATCCAGTTGATTGTTTTGGATGAGAAGTGGAATTCAGGAGGGTACAAATA
CGAATACAAGTAATGCATAAGAATTGATTTACGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E23265g_CDS-001

Protein length: 367 aa.
Product: RNA export factor associated with the nuclear pore complex (NPC), putative

>YALI0E23265g_CDS-001 MSSVFGSARTTSGFGGLTQTSSAGTVQDMANDPTLANPPEDSVSDICFSPQAEFLSVASW
DKKVRIYEVSPQGQSRGVALYDHQAPVLSTHWSLDGTKVASGGCDNAVRVFDMQSQQAQQ
VGQHESSVRCVRFVAAGPSDTPILASAGWDKKLHYWDLRTPNPVSTIALPERAYSMDTSK
QLLVVATAERHILAINLSNPGAVAKTLQSSLKFQTRVVSCWPAGDGFAVGSIEGRCGIQY
VDDTQAKNKNFSFKCHRQTPNPSKNEVDIYAVNAISFHPQEGTFCTAGADGSLTFWDKDS
RHRLKGYPQLGCTIPATAFNRDGSIFAYAQSYDWSKGHSYNNKDIPHTVRFHQTKAEEVK
AKPKRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG