YALI0E22825g

Overview

Description some similarities with uniprot|Q09825 Schizosaccharomyces pombe Spindle pole body associated protein sad1
Locus type CDS
Locus tag YALI0E22825g

Location

Species Yarrowia lipolytica Positions 2693347..2695601
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2255 (nuc.)
Previous locus YALI0E22803g Next locus YALI0E22847g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22825g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22825gYALI0E22825g_mRNA-001YALI0E22825g_CDS-001

Nucleotide sequence

 

>YALI0E22825g
ATGTTCTCAAATACGCCGTTACGATCCAAGAGTAGAGACAGACACGCTGGTGGCCTCAAG
TCGCGTAAGAGCGTGCAATGGCAAACAGAGACCGAAAAACACGACCCTCAAACGTCGACT
CTGGAAGGAAATAGAAGCCCCAGGCAACCACACAACTCGTCCGAACTGTCGTTAGACGGA
TCCAAGCGACATCAGGATTTTTATGACTACAGTGAGGAGCAGGCCTTGTTCGATTTGCTG
CAATCAGATCCCGAAAAGGTGACCCAGATGCTCACGGAGATGGACATCTCTGAAGAGGAG
GAACATGGGCTACAGCAGGAAGACAAAGCATCTCTCGTGAACACAATTCAAGAACTGGCC
TTAAAAGGGGCCGAGTACACGGGGGACGCGTTGCGCAAGGGCGTCACTCCTGCCGTCAAG
GCTCTCCTGGCTGCGGCATTCTTCTACTACGTCGCTACGCATGTTTCGTTACCTGGTATC
GGCAACAACAACAAGATCCCAGCATTCGAGCCTCCGGTCGAACCACCACAAGACATCTCC
GAGCTGTCTAGCCGACTACAGAGACTCGAATCTGAGCTGTCTCGCGTTGGTTCGGATTCA
GATAGCTCTTCTGAATGGATCTCAATCAACAAGGTGGTCATTAAGGAGCTTCCCTCAAAG
GTGGAGTCCGTGGAGAAGGCGCTTGGAGGAATTGATGTGGAGGCACGAAAGCTGGGAAAG
TCCATGGAGAAAATCACAAAAGATACCCGGCTTCTTCTGGACGACAACAGCGCCTTCTCC
GATACTCAGAAGAAGTGTGTTTCGGAGCTGGAATCGCTCAAGCAGCAGCTCGTCAGACAA
CGAGAGGCAATCAATGCCATCAAGTCGAATGAAATGGATACCACGCCTGCTCTGGCTATT
CTGGGAGGCACTGTTGAACGAATTGATGGAGACTTGACAAGATTGGCTGCTGATCTGGAG
AAACAAAGGAAGCTGGACTCCAAACATATCACTCAGCTAGTCACTGAGGCCATTGAGAAG
GCTGTGCCAGAGAACCGGCCTGATTTATTCATCGATACCAAACACCAATTTGAAGATTAC
ATTGCCTCTATTGTTCCAGAAATCAAGGCCGAAGTTCTGGAGATTGTTTCTTCCTCTAAA
CATGCCACTAACGACACGGTTGACTTCTCTGCTCTCATTTCCAAAGCTGTGGCTCAAAAG
GTGGCTGAATTGGACTTGGAGTCTCTGTTTGTTAACCCCGACGAGCTCAAAACAGTTCTA
AATGAAGAGATTGGACAGGTGAAGAGCCATGTGGATGCCAAGGTTGGAAAGGTGGAAACA
GAAGTCGCACAAGTCAAGTCAGAGGTTGGCCAAGTCAAATCGGAGGTGGACCACATTCAG
TCAAACATCCGCCATATCGAGAGTGAGGTGGCTCAGGTTGAGGCCAACAAAACTTCCACA
TCTCGAACACCTAGAGAAGAGGGGGTTGCAGAGAAAATCATTAACTTTGCCTCGCTGATC
AACGGGGCTCGAATAGATACAGAACGCACCACTGCTCTCTATGATCCCTGGAGTGGAAGT
AACCCCGTGTACTGGGCATTCCGAAGATCTCTCTCTACTATGGGCATTGGAAAGCCTCTC
GTCCGAAGACCCTGGGTGGCTCTCATTGGGGACATGTCTGGAGGAAGCTGCTGGCCTTTC
AATGGACGAAGGGGCCAACTGGCAGTCAAGCTGGCCGCCAAAATGGTGCCCACTTCGTTC
TCTCTACGACACGCAGTGGCAGCCGACGACATGTTCCTGGGTTCAGCCCCGCGGTTCTTC
AATATCTGGATCAAGGTAGACGACTCCAAGCTCAGAGACCAGATCAACACTGCGTCTGAA
GCGTACCGCCCTTACAACATTCCTTGGGACTACATTCTGGTCGGCCAGTACGAATTCGAC
CCTGCCGAGAATGCCAATTCATGGTACCCAGTGCCCCAGAACATCCGCAACCTCGAAATC
CAGACTGAGGAGACCATTTTCGAGTTTGTTGAAAACTGGGGCCATGACAGGTTTACTTGT
GTGTATCAAGTGGGTGTCCATGGTGTTCAGGCCATTTCAGAAGAGGAGGAAGTTGAAGCA
GAGGTGATTGAAGAGACTGAAGACATCACAGCCGAAGAAGATCAGGAAGATCAGTCTGTT
GTGAAAGACGTCTAGACGATGTCAACAATCTAACATCGGTGTACAACATGTAATGTATCT
AATATTTATCTACTAATATATCACAAATATAAGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22825g_CDS-001

Protein length: 725 aa.
Product: Conserved hypothetical protein

>YALI0E22825g_CDS-001 MFSNTPLRSKSRDRHAGGLKSRKSVQWQTETEKHDPQTSTLEGNRSPRQPHNSSELSLDG
SKRHQDFYDYSEEQALFDLLQSDPEKVTQMLTEMDISEEEEHGLQQEDKASLVNTIQELA
LKGAEYTGDALRKGVTPAVKALLAAAFFYYVATHVSLPGIGNNNKIPAFEPPVEPPQDIS
ELSSRLQRLESELSRVGSDSDSSSEWISINKVVIKELPSKVESVEKALGGIDVEARKLGK
SMEKITKDTRLLLDDNSAFSDTQKKCVSELESLKQQLVRQREAINAIKSNEMDTTPALAI
LGGTVERIDGDLTRLAADLEKQRKLDSKHITQLVTEAIEKAVPENRPDLFIDTKHQFEDY
IASIVPEIKAEVLEIVSSSKHATNDTVDFSALISKAVAQKVAELDLESLFVNPDELKTVL
NEEIGQVKSHVDAKVGKVETEVAQVKSEVGQVKSEVDHIQSNIRHIESEVAQVEANKTST
SRTPREEGVAEKIINFASLINGARIDTERTTALYDPWSGSNPVYWAFRRSLSTMGIGKPL
VRRPWVALIGDMSGGSCWPFNGRRGQLAVKLAAKMVPTSFSLRHAVAADDMFLGSAPRFF
NIWIKVDDSKLRDQINTASEAYRPYNIPWDYILVGQYEFDPAENANSWYPVPQNIRNLEI
QTEETIFEFVENWGHDRFTCVYQVGVHGVQAISEEEEVEAEVIEETEDITAEEDQEDQSV
VKDV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG