YALI0E21329g

Overview

Description similar to uniprot|P36015 Saccharomyces cerevisiae YKL196c YKT6 SNARE protein for Endoplasmic Reticulum-Golgi transport
Locus type CDS
Locus tag YALI0E21329g

Location

Species Yarrowia lipolytica Positions 2536693..2537560
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 868 (nuc.)
Previous locus YALI0E21307g Next locus YALI0E21351g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21329g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21329gYALI0E21329g_mRNA-001YALI0E21329g_CDS-001

Nucleotide sequence

 

>YALI0E21329g
ATGAAGCTGTATTACATTGGCATTCTGCGACCAAACAAGCCTGAGGCCGTGCAGCTGGCC
TCCGCCTCTGATCTCTCGTCGTACTCGTGGTTCGAGAGATCGACTGTTGGCCAGGCCTTC
ACTTTTCTGGCCGAGACTGTGATCCCTCGAACTGAGCCTGGACAGAGACAGTCAGTCGAG
GAGAACGACTACGTGGGTCACGCCTACCTGCGAAGCGACGGACTGGGCGGTGTGATCATC
ACCGACCAGGAGTACCCCGTTCGAGTGGCCTACACCCTTCTCAACAAAGTGCTGGAGGAG
TATCTCACTAAGCACCCCAAGGCCGAGTGGGAGAACGCCAAGGAAGCCTCTTCCAAGCTG
GCCATGCCCGAGCTGGAGGACTATGTCAAGCGGTACCAGGACCCCCACCAGGCCGATGCC
ATCATGCGAGTGCAGCAGGAGCTGGACGAAACCAAGATTGTGCTGCACAAGACCATCGAG
TCTGTGCTGGCTCGAGGCGAGCGACTGGACACCCTTGTGGACAAGTCCGAGGCTCTGTCG
CAGTCATCCAAGATCTTCTTCAAGCAGGCTAAAAAGACCAACAGTTGCTGTATTCTCATG
TGATTGATCCTGTCTGAGCGAGCAACAAGAAAGCCACGAAAAGAGCGCCCAAGAACACTC
CACTTCCACTCAACTACAAGTACATCAATCTCTGGCTGCATCATTATGTAAAGGTAATAG
ATATTTATTGAGATACACGCTAAAGGGTGACGAGACGGATCAGAGATGAGTATTGGCGGC
AATCTGCTGTGATAGTGGTCTGCTGTGAGACATCTGATCACAACCACTTCACCATGAATA
TATTATGAATCTATTTGTTTATTAGCTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21329g_CDS-001

Protein length: 201 aa.
Product: Vesicle membrane protein (v-SNARE) with acyltransferase activity, putative

>YALI0E21329g_CDS-001 MKLYYIGILRPNKPEAVQLASASDLSSYSWFERSTVGQAFTFLAETVIPRTEPGQRQSVE
ENDYVGHAYLRSDGLGGVIITDQEYPVRVAYTLLNKVLEEYLTKHPKAEWENAKEASSKL
AMPELEDYVKRYQDPHQADAIMRVQQELDETKIVLHKTIESVLARGERLDTLVDKSEALS
QSSKIFFKQAKKTNSCCILM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG