YALI0E21307g

Overview

Description similar to uniprot|P00175 Saccharomyces cerevisiae YML054c CYB2 lactate dehydrogenase cytochrome b2
Locus type CDS
Locus tag YALI0E21307g

Location

Species Yarrowia lipolytica Positions 2534818..2536377
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1560 (nuc.)
Previous locus YALI0E21263r Next locus YALI0E21329g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21307g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21307gYALI0E21307g_mRNA-001YALI0E21307g_CDS-001

Nucleotide sequence

 

>YALI0E21307g
ATGGTTTCCGTCGAAGAAGGTGAGTACAAAACGAAACATTCTTGCCGACCCATCTAACAC
AGTCGCTAAACACAACTCCAAGGACTCTTGCTGGGTCATTTTGCATGGAAAGGCCTATGA
TCTGACCGAGTTCCTGCCTGAGCATCCTGGAGGACAGGCTATCATTCTCAAGTACGCTGG
AAAGGACGCCACCAAGGCTTTTGACCCAATCCACCCTCGTGATGTGGTCGATAAGTTCTT
GGATAAGGACAAGCACCTGGGAGAGGTGACTGGAGAGATTGCCGCCGAAGAAGAAGAGGA
AGTCACTCCAGAGGAAAAGGCGCGTCTTGAGCGGTACGAGAACCGTCCTCCCCTCAGCCA
GATCTTCAACTCGTTCGATTTTGAGTACGTGGCTAGACACACCATGTCTCCCAACGCATG
GGCGTACTACTCTTCTGGATCCGATGACGAGATCACTGTCAGAGAAAACCACAGAGCCTT
CCACAAAATCTGGTTCCGACCACGAGTGCTGGTAGATGTCAAAAACGTGGACATTTCCAC
CACCATGCTGGGCACAAAGTCATCCGTACCGTTTTACATCACCGCTACAGCTCTAGGTAA
ATTGGGCCATCCCGAGGGAGAAGTGGTGCTCACACGTGGAGCCGACAAGATGGATGTCAT
TCAGATGATCCCCACTCTGGCCTCGTGCTCGTTCGACGAGATTGTGGACGCCGCCACAGA
CAAACAGACTCAGTGGATGCAGCTGTACGTGAACATGGATCGAGAGGTGACCAAAAAGAT
TGTGCAGCACGCCGAAAAGCGGGGAGTCAAGGGTCTGTTCATCACTGTGGACGCTCCTCA
GCTTGGACGACGAGAAAAGGACATGCGAACCAAATTCGGAGATCCTGGAGCTCAAGTTCA
GCAGTCCGACGACTCTGTGGACCGATCTCAGGGAGCTGCTCGAGCCATTTCCTCGTTCAT
CGACCCCTCTCTGTCGTGGAAGGACATCCCCTGGTTCCAGAGCATCACCAAGATGCCCAT
CATTCTCAAGGGTGTTCAGTGTGCTGAAGATGCGCTCAAGGCTGTGGAATACAAGGTGGA
CGGTATCCTGCTGTCTAACCATGGAGGTCGACAGCTGGAGTTTGCCCGGCCCTCAATCGA
GGTGCTGGTCGAAGTCATGGCTGCTCTGAGGGCAAAGGGATGGCAGGATTACATCGAGGT
GTACATTGACGGAGGTATAAGACGAGCCACTGACGTTATCAAGGCTCTGTGTCTGGGTGC
CAAAGGAGTGGGTATTGGACGGCCTTTCCTGTATGCTATGAGCACATATGGAGAGGATGG
CGTGTGCCATCTGATCCAGCTGCTCAAGGATGAGATGGAAATGAACATGCGTCTGATTGG
AGCCACCAAGATTGAGGATCTCAACCCCAGCATGGTTGACCTCAAGAGCATCTTCACCCA
CTCGGCAGACACCGCTCGGGACATTCTGGGAGAGAATGTTTACCAACATATGGAGATGCC
TCTTTTCAAGGGCAGCAAGCTGTAGATATAGTGAATGAGCGCATGAGTATAGAAGTGTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21307g_CDS-001

Protein length: 494 aa.
Product: Cytochrome b2 (L-lactate cytochrome-c oxidoreductase), putative

>YALI0E21307g_CDS-001 MVSVEEVAKHNSKDSCWVILHGKAYDLTEFLPEHPGGQAIILKYAGKDATKAFDPIHPRD
VVDKFLDKDKHLGEVTGEIAAEEEEEVTPEEKARLERYENRPPLSQIFNSFDFEYVARHT
MSPNAWAYYSSGSDDEITVRENHRAFHKIWFRPRVLVDVKNVDISTTMLGTKSSVPFYIT
ATALGKLGHPEGEVVLTRGADKMDVIQMIPTLASCSFDEIVDAATDKQTQWMQLYVNMDR
EVTKKIVQHAEKRGVKGLFITVDAPQLGRREKDMRTKFGDPGAQVQQSDDSVDRSQGAAR
AISSFIDPSLSWKDIPWFQSITKMPIILKGVQCAEDALKAVEYKVDGILLSNHGGRQLEF
ARPSIEVLVEVMAALRAKGWQDYIEVYIDGGIRRATDVIKALCLGAKGVGIGRPFLYAMS
TYGEDGVCHLIQLLKDEMEMNMRLIGATKIEDLNPSMVDLKSIFTHSADTARDILGENVY
QHMEMPLFKGSKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG