YALI0E20845g

Overview

Description similar to uniprot|C5DZV1 Zygosaccharomyces rouxii ZYRO0G07436p
Locus type CDS
Locus tag YALI0E20845g

Location

Species Yarrowia lipolytica Positions 2471427..2473493
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2067 (nuc.)
Previous locus YALI0E20823g Next locus YALI0E20867g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20845g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20845gYALI0E20845g_mRNA-001YALI0E20845g_CDS-001

Nucleotide sequence

 

>YALI0E20845g
ATGAAACTTCAGCTGCTGCTTTCTGCTGGTTTGGCTCTAGCTGGCTCGCTCATCAAGGTC
CCAGACACCCACTACAAGGGTCATGATGAGCTCGTCGAGTACGGAGTCAACGCCATTGCT
GAGCTCTACAACTCAACCCATCTGGACAAGTGCGGCAAGTGTCTTTCTGCTCTCCAGCTC
GGAAAGACCATTGCTCTGCAGAACGACAAAGTGATTCCCGAGATTCTCATCAAGCTGTGT
GAAAAGTACCACTGGGAGGAGTTCTGTACCGTCGAATACCAGGGCTTCAACTTTGGAGTC
GCCTCAAAGGGTGCCCATATCGCCAATGTTCTGACTCTCATCGATCCCACCGGTATTGAT
GGAGAGTACCTGTGCTACTACCAAGTCCGAAAGTCGTGTCCCTTGCCTCCCACTCCCAAG
TACAACCTGACCGGATGGTGGCCTGAGAAGCCTAAGAACCTATCTCTCCCCAAGTCTGAC
GGCGAGACCTTCAATGTAGTCCATCTGTCGGACTTCCATGTCGATCTCCGATACCAGGTT
GGAGGAGAAGCAAACTGTACTGGAGGCTACCACATGTGCTGCGTGGACGCTCTTCACAAC
GGCCCTGCTTACAAGGCCAACTACACCGATATTGTTCTTCCTGCTCAGAAGTATGGATCT
TACGACTGTGACATCCCCCAGATTCTCCTGGAAGACTCTCTTGCCAATGTGGCCAAGATT
GGACAAAACCTGTCTTTCGAGTTTGGCATCTTCACCGGAGATATGGTATCTCACGACATT
GACAGCTGGTTCTCTTTGGCCAAGATCATTGAGTCCGAGGAAGATGTCTACTACAACATG
AAAAAGTACCTTGGGGACATTCCCATCTACTCTACTTTTGGCAACCACGACTCTTTTCCT
TACGCCCAGCAGGCGCAGAACCGATCTGGTTTCCTTGGAGAGTTCATCTGGAACGCCCAA
TTGTCGGCTGATCTGTGGAAGGACTACGGTTGGATAGATGAAGAGACCCAGGCCGAAGCT
ATCCATACTTATGGATCTTATGCTGTTAACACCAAGAGAGGCCTTCGAGTTATTTCTCTT
GACTCCAACTTGTGGTACCAACCCAACTACTACAATTACTGGAACATGACCGACCCTGAT
ACCTCCGGACTCATGAAGTGGCTTGTTGACGAGCTTGTTGACGCTGAGAAGAAGGGTATT
CGAGTGTGGATCATGGCTCATGTCCCTACTGGGGGAGGAACCGGAAACGCCATGCCTCAT
CAGACTGAGGTCATTCGACAGATTGTGGACCGTTTTGCCCCCGAGACCATTGTTGCCCTC
TTCTTTGGACACACCCATGAAGACCAGTTCAATGTCTACTACGCAGGAAACGGAACCGAC
AACAGTCTGGAGAATGCTCTGACTGTGGGCTGGATCTCTCAGTCCGTCACTCCTCTTCAC
AACTACAACCCATCATGGAGATACTACGAGGTCGACACCAAGACCTTTGAGATTGTCAAC
TCTATCAACTACTACGCCCAGCTCAACAAGACTTTTGAGTACGATATCGACAAGCCCGAG
CTCTCCAACTCCACCACTTTCCCTCATATCACCTACCCTCCTCGAAAGCCCGACGACAAG
TTGGACTGGATCTTTGAGTACTCCGCACGAGACGTCTATGATCCCGACCACAAGTGGCCC
AAGTCTGCTCCCTTGAACGCCACCTTCTGGCACAATGCCATCCAGTACATTGTCAACAAC
AAGACTGGTCGAGAGGACTACCTGCGATACGAGTACCGAGAGAGCCCTTTTGTTCCTGAC
GGAAGCTCCCCCGAATACATCAAGAACATGTACTGCTACTTTTCCTCCGGTACTGTTCCT
GCCGTATACGAGTGTCAGAAGCGACAGAACATTACCAAGGAGATTTGGATTTAGTTTCCA
GGGGCTATGGAGGGAGAGCAAGAGAGGCTTGGATATATTTGCATGAGGGACATGGAGGAG
AACTACTCCACAAGTACTTGTTGATTCTACCATAAACGGTAATTGACGTATTTTTTTATC
AATAACAATATATATATTTCATTTTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20845g_CDS-001

Protein length: 638 aa.
Product: Conserved hypothetical protein

>YALI0E20845g_CDS-001 MKLQLLLSAGLALAGSLIKVPDTHYKGHDELVEYGVNAIAELYNSTHLDKCGKCLSALQL
GKTIALQNDKVIPEILIKLCEKYHWEEFCTVEYQGFNFGVASKGAHIANVLTLIDPTGID
GEYLCYYQVRKSCPLPPTPKYNLTGWWPEKPKNLSLPKSDGETFNVVHLSDFHVDLRYQV
GGEANCTGGYHMCCVDALHNGPAYKANYTDIVLPAQKYGSYDCDIPQILLEDSLANVAKI
GQNLSFEFGIFTGDMVSHDIDSWFSLAKIIESEEDVYYNMKKYLGDIPIYSTFGNHDSFP
YAQQAQNRSGFLGEFIWNAQLSADLWKDYGWIDEETQAEAIHTYGSYAVNTKRGLRVISL
DSNLWYQPNYYNYWNMTDPDTSGLMKWLVDELVDAEKKGIRVWIMAHVPTGGGTGNAMPH
QTEVIRQIVDRFAPETIVALFFGHTHEDQFNVYYAGNGTDNSLENALTVGWISQSVTPLH
NYNPSWRYYEVDTKTFEIVNSINYYAQLNKTFEYDIDKPELSNSTTFPHITYPPRKPDDK
LDWIFEYSARDVYDPDHKWPKSAPLNATFWHNAIQYIVNNKTGREDYLRYEYRESPFVPD
GSSPEYIKNMYCYFSSGTVPAVYECQKRQNITKEIWI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG