YALI0E20823g

Overview

Description weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
Locus type CDS
Locus tag YALI0E20823g

Location

Species Yarrowia lipolytica Positions 2468767..2470205
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1439 (nuc.)
Previous locus YALI0E20801g Next locus YALI0E20845g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20823g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20823gYALI0E20823g_mRNA-001YALI0E20823g_CDS-001

Nucleotide sequence

 

>YALI0E20823g
ATGGCCCTGGGGATGCCAACTCTGATGAAGAGGTCGGCCCCCAAGGCTCTGGAGATGTCC
TTTGACGTGGTCAAGGGTATATCCAACAAGTGGAGTGAACCCCAAACTGATGCTGCTGGC
TCACCATCACCACATCATGACACTCCTTTGGAAAACATGGGTTACTACTACCAGGTGAGT
GTCAGCATTGGCTCTCCTCCACAACCGTTTGCATTGTCGCTCGATACTGGATCTTCAGAC
CTGTGGGTCCCTTCTCCCAACAACAATGAGTGTCTGAGTCCTCTCTTCACCAGTAGAGGT
GGATCGTGTGGGCAAACCAACAACGTTTTCAACCGAATGATCTCCTCCACCTTTTCCCTC
ATCAACGAGTACTTCTTCATCTCTTACGGAGATTCCACTTCTGCATACGGTCTGTGGGGT
AAAGATACTCTCAACTTCAACGGTCTGACTCTCACAGACTACACCTTTGGGGTCGCCTCA
GGGACCACTTCCACAACCAATGTGTTCGGAATCGGCCTCAAGGGGCTCCAAGCTTCCAAT
GATGCCATTCCTGGTCATCCTGAAGCGCCCAGGTTCACCTATTCTAACTTACCTTATCGA
CTGGCTGAAGAGGGATACATCAACACCCCCTCCTATTCCCTCTACCTAGACTCGTTAGAG
GCCACTTCGGGCACCATCATATTCGGAGGCGTAGACGCTTCCAAGATCCAGAGCCCCATC
ACTCTTCACCCTCTCATCAATTTCCATCCCGAAAACCACCCCGATCCCGTCTCGTTCTTC
ATCACTCTTGACTCAGTTGATCTGGTCGGAGGAGTGCCTCTTAACGTGCTCGAGGTTACT
TCTGCTGCCCTATTGGACTCTGGAGCCACACTGACTTTTCTCCCCCCGTCTGCCTACGCT
ACTCTGGCAGACCGGTTCCAGGTCAAACAAGACACCAAAACGGGTTACAGAGTCGCCAGC
TGTTCTTCAGGAAGCGTGGGCGAGTATCTTGAGTACTCATTCCAAGGATCAAAGATCCGC
GTGCCCATTTCCTCCCTGCTAGACCCCATCAAGAAACAAGATGGATCGGCCGTCATCTCT
CCAGATGGCATCCCTATGTGCCGCTTTCTCGTGGCCCCAAACGCCGACGACGAAACAGGC
ACCAGCAACATCATTCTAGGAGACTCCTTTCTGCGATCGGCTTACGTGGTTTACGATCTC
GAAAACTTTCAGCTTGGGCTGGCCCAGGCGGCCACCTATAGTAACGGGGCTTCTTCTTTG
GTGTCTGCTATCGACCAAAACGGCATTCCTGGCTCTCAGCAACCACCCAGCTCCAAAACA
TGGCAGGCAAACTCGCCAATGCCCACCTTCCACGGCTATGTTCCCCCTCAAGTGGATCTG
CTTTGGTAGGTATCTCATGAAACAGTATTGCAGTAATAATAATAATAATAATATATACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20823g_CDS-001

Protein length: 463 aa.
Product: Conserved hypothetical protein

>YALI0E20823g_CDS-001 MALGMPTLMKRSAPKALEMSFDVVKGISNKWSEPQTDAAGSPSPHHDTPLENMGYYYQVS
VSIGSPPQPFALSLDTGSSDLWVPSPNNNECLSPLFTSRGGSCGQTNNVFNRMISSTFSL
INEYFFISYGDSTSAYGLWGKDTLNFNGLTLTDYTFGVASGTTSTTNVFGIGLKGLQASN
DAIPGHPEAPRFTYSNLPYRLAEEGYINTPSYSLYLDSLEATSGTIIFGGVDASKIQSPI
TLHPLINFHPENHPDPVSFFITLDSVDLVGGVPLNVLEVTSAALLDSGATLTFLPPSAYA
TLADRFQVKQDTKTGYRVASCSSGSVGEYLEYSFQGSKIRVPISSLLDPIKKQDGSAVIS
PDGIPMCRFLVAPNADDETGTSNIILGDSFLRSAYVVYDLENFQLGLAQAATYSNGASSL
VSAIDQNGIPGSQQPPSSKTWQANSPMPTFHGYVPPQVDLLW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG