YALI0E20603g

Overview

Description similar to uniprot|Q96X05 Emericella nidulans SNO1 Sno-type pyridoxine vitamin B6 biosynthetic protein
Locus type CDS
Locus tag YALI0E20603g

Location

Species Yarrowia lipolytica Positions 2440559..2441371
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 813 (nuc.)
Previous locus YALI0E20581g Next locus YALI0E20625g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20603g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20603gYALI0E20603g_mRNA-001YALI0E20603g_CDS-001

Nucleotide sequence

 

>YALI0E20603g
ATGACCAAGACTCAGACCGTTGGTGTGCTTGCTCTTCAGGGAGCTTTCGCCGAGCACTGT
CGACATCTCGAAAAGGCCGCTGCCAAGCTCCACAAGGATGTTGAGGTTATCGAGGTCCGA
ACCCCCACCGAGCTGGAGAAGTGCGAGGGTCTGGTGATTCCCGGAGGCGAGTCCACCGCC
ATTTCTCTGGTGGCCCAGCGATCCGCCGGTATGCTGGATGCTCTGCGAAAGTTTGTCACT
GTGGACAAGAAACCCACCTGGGGCACCTGTGCTGGTCTGATTCTCATCTCCTCCGGTATC
TACGACCACAAGACCGAGAAGCAGACTCTGGCCGGCACCCCCGAGATTGACGCACACGGA
AACAAGGTCGCTGACCAGACCGTTTCTGCTCTCTTTGGAGGCCTGGACGTGGTGGTGTCT
CGAAACTACTTTGGCCGACAGCTGGGCTCCTTCATCGCCCCTCTCAAGCTTAGCAACTTT
GGAGTCTCCTCTACAATCACCGACAAGGAGGCTGTTTTCGACGCCGTTTTCATTCGAGCT
CCTGTAGTTTTCAAGACTCTCAACGACGACGTCAAGGTTCTGGCTGAGGTTGAGGATCCC
TCTGATCCCACCAAGAAGCTCATTGTGGCTGTCGAGCAGGGCCACATGATGGGCACCTCT
TTCCACCCCGAGCTCAGTGACGACACTCGAATTCACGAGATCTGGCTCAGCAAGTTTTTG
TAAGAAGCTGAAGAAAAGAGCAAGATGGACTACGATAGGGAGCATGATAGATAGGAAATG
ACTTGTATAGTATGGGATGGGATTATCAGCTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20603g_CDS-001

Protein length: 241 aa.
Product: Sno-type pyridoxine vitamin B6 biosynthetic protein, putative

>YALI0E20603g_CDS-001 MTKTQTVGVLALQGAFAEHCRHLEKAAAKLHKDVEVIEVRTPTELEKCEGLVIPGGESTA
ISLVAQRSAGMLDALRKFVTVDKKPTWGTCAGLILISSGIYDHKTEKQTLAGTPEIDAHG
NKVADQTVSALFGGLDVVVSRNYFGRQLGSFIAPLKLSNFGVSSTITDKEAVFDAVFIRA
PVVFKTLNDDVKVLAEVEDPSDPTKKLIVAVEQGHMMGTSFHPELSDDTRIHEIWLSKFL
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG