YALI0E20581g

Overview

Description similar to uniprot|P38701 Saccharomyces cerevisiae YHL015w URP2 ribosomal protein
Locus type CDS
Locus tag YALI0E20581g

Location

Species Yarrowia lipolytica Positions 2439432..2440006
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 575 (nuc.)
Previous locus YALI0E20559g Next locus YALI0E20603g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20581g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20581gYALI0E20581g_mRNA-001YALI0E20581g_CDS-001

Nucleotide sequence

 

>YALI0E20581g
ATGTCATTCAACAAGGATAAGGCCGACGCTGAAGCTCCCCAGCAGCTCCGAAAGATCAGA
ATCACTCTGACTTCCACCAAGATGAAGTCTCTTGAGAACGGTGAGTGAAAATGGGCGCGA
CGAGATATGAGAATGGCAGCACTTAAGATACCCAATTACGTAACTGGAAATGACGACAGT
TCCAGGACCGGGAACCTCTCTCCAAACGATGAAATACTAACACAGTCTCCGCTGACATCA
TCTCTCGAGCTAAGAACTCCAACGTTGGCGTCAAGGGCCCCGTCCGACTCCCCACCAAGG
TTCTTAACATCACCACCCGAAAGACCCCTAACGGTGAGGGTTCCAAGACCTGGGATCACT
TTGAGATGCGAATCCACAAGCGACTCATCGATCTCCACTCCCCTGCTGAGGTTGTCAAGA
AGATCACCTCTATCAACATCGAGCCTGGTGTGGATGTTGAGGTCACCATTGCCGCTTAAG
CTTGTTGACCCCAAAACTTGGTATAAAAAATTGCACATGTATTATTGATGTCAGGTGGTA
ACTTATCTACAATAACATGTATTTATTCAGTAGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20581g_CDS-001

Protein length: 118 aa.
Product: Ribosomal 40S subunit protein S20, putative

>YALI0E20581g_CDS-001 MSFNKDKADAEAPQQLRKIRITLTSTKMKSLENVSADIISRAKNSNVGVKGPVRLPTKVL
NITTRKTPNGEGSKTWDHFEMRIHKRLIDLHSPAEVVKKITSINIEPGVDVEVTIAA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG