YALI0E20471g

Overview

Description similar to uniprot|Q1K6Q7 Neurospora crassa 64C2.200 Related to putative tartrate transporter
Locus type CDS
Locus tag YALI0E20471g

Location

Species Yarrowia lipolytica Positions 2426990..2428533
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1544 (nuc.)
Previous locus YALI0E20449g Next locus YALI0E20493g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20471g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20471gYALI0E20471g_mRNA-001YALI0E20471g_CDS-001

Nucleotide sequence

 

>YALI0E20471g
ATGGAGAAAGAAGACATCCACCACGTGGAGAAGACATCGATCGATGTGTACGAGGAAAAA
GTCCGCAAGCCTACCACAGCTGAGGAAATGTTTCCCAACATTGACAAGAAGAAGCTGCTT
AAAAAAATGGATATGAATATCATCCCTATTCTATCTCTGTTGTATTTGCTGTCCTTCCTG
GATCGAGGTAATGTTGGTAACGCCAATATCGAAGGTCTGTCTGTTGATCTCGGTCTCACT
GGCCCTCAATACAACATGTGTCTCACTGTCTTTTTCTTTACATACTCAGCTTTTGAGGTG
CCATCCAACATGATTCTCAAGAAGCTCAGACCCTCCATCTGGCTTCCTCTCATTATGGTT
GCTTGGGGCATCGTCATGACTTTGATGGGGCTTGTCAAGAACTACCATGGGCTTCTGATC
TGTCGAATTTTTCTCGGAGTGACTGAAGCTGGTCTTTATCCTGGCGTCGGCTACTACCTC
ACTCTGTGGTATTGCCGATCAGAGATCCAGTTTAGACAGGCAATGTTCTTCTCTGCAGCC
TCCATTGCCGGTGCCTTTTCTGGTCTGCTGGCTTTCGGTATTGGAAAAATGAAGGGCGTG
GCTGGACTTCACGGATGGCAATGGATCTTTATTCTCGAGGGAATTGCTACGGTTGTGGTA
GCCTTCATCGCCTTCTTCTTCGTCCATGACTTCCCTGAAACAGCTCGATTCCTCACCGAA
GAAGAGCGGGAGTTTGTCGTGTGGAGACTCAAGTATGATGGCAACGACAATAGTGCCGGG
GGTGAACTGGTAGCGCAGAACGACTCTCGTGACTGGAAGTACGTCTGGGCCGCCTTCACC
GATATCCAGGTCTACGTCCACCTGCTTCTCTACTTCGGAGTTGTGGTTCCTCTCTACGGC
ATCTCCCTCTTCCTTCCCACCATTGTCAACAACCTGGGATACACCTCCTCCACAGCTCAG
CTCATGACTATCCCTATCTACGTGATTGCTGCTATAGCTTCGGTGACTCAAGCTTGGTTC
TCGGACAGATATGGTAAGAGATCTCCCTTCATTCTCGTCAACCTGCTATTCATGCTGTTT
GGCTACTTGTTGGCCTTCAACCTGTCTCACAAAAAACCAACTGCAGTCTACGTGGGCTGC
TACTTCATCGCACTAGGACTGTACCCAGCTCTGCCCGCTATTGTCTCGTGGATGTCCAAC
AACGTCGCAGGTACATACAAACGAGCTGTAGCTATGGCCATCCAGATTGGCATTGGAAAC
CTCTCTGGGGCCATTGCGTCCAACATTTACCGAGCCGAAGACAAGCCCGAGTTCAAGCTG
GGTCACGGTATGGAGATCATGTTTGTTTGCATTGGAATCGTGTCTCTCATTGTGCTCAAC
TTTGGCTACCACGTTGTCAACAAGAGGAAGCAGGCCAAGATTGAGTCGGGCGAATGTGAG
CATCTTACCAGTGCCGAGCTGTCTGAAATGGGCGACAGGTCTCCCTATTTCCGATACAGA
CACTAGTTATTTATATATCGAATTAATTCATTTCTTGCAAGACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20471g_CDS-001

Protein length: 502 aa.
Product: Tartrate transporter, putative

>YALI0E20471g_CDS-001 MEKEDIHHVEKTSIDVYEEKVRKPTTAEEMFPNIDKKKLLKKMDMNIIPILSLLYLLSFL
DRGNVGNANIEGLSVDLGLTGPQYNMCLTVFFFTYSAFEVPSNMILKKLRPSIWLPLIMV
AWGIVMTLMGLVKNYHGLLICRIFLGVTEAGLYPGVGYYLTLWYCRSEIQFRQAMFFSAA
SIAGAFSGLLAFGIGKMKGVAGLHGWQWIFILEGIATVVVAFIAFFFVHDFPETARFLTE
EEREFVVWRLKYDGNDNSAGGELVAQNDSRDWKYVWAAFTDIQVYVHLLLYFGVVVPLYG
ISLFLPTIVNNLGYTSSTAQLMTIPIYVIAAIASVTQAWFSDRYGKRSPFILVNLLFMLF
GYLLAFNLSHKKPTAVYVGCYFIALGLYPALPAIVSWMSNNVAGTYKRAVAMAIQIGIGN
LSGAIASNIYRAEDKPEFKLGHGMEIMFVCIGIVSLIVLNFGYHVVNKRKQAKIESGECE
HLTSAELSEMGDRSPYFRYRH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG