YALI0E20449g

Overview

Description weakly similar to uniprot|P34161 Saccharomyces cerevisiae YML027W (ohnolog of YDR451C) YOX1 homoeodomain protein
Locus type CDS
Locus tag YALI0E20449g

Location

Species Yarrowia lipolytica Positions 2423925..2425433
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1509 (nuc.)
Previous locus YALI0E20427g Next locus YALI0E20471g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20449g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20449gYALI0E20449g_mRNA-001YALI0E20449g_CDS-001

Nucleotide sequence

 

>YALI0E20449g
ATGGATCTGGCGAAAATCACCGACGGCTTCGTCAAGCACGAGACCTCGTCGTCGTCCTCT
TCTTGCTCCACCACCAACACAGGGCCCACCCCAGACTTGTCTCCAGTGACGCCCTCCAAG
GAATGTGAGAAGCGGCCACGAGAGGACGACCCTGAAGAGTCGCACGACACGAGCGCCGGC
GCCAACAGCAACAACAACGCTAGCGTGTCTCTCATGTCCACCCCAGAGCCCAAGTCGTCG
TCTCCCCCCGGACTGTCGCATTTCGCACACCTGATGCAAAAGTCGGACACCATGTACCGA
CAGAACCTCAACTCGGACCAGTACATCTACTCGGACGAGGAGAAGGAGAACCACAAGACT
TCGGGCAAGCCCCACACCCCCCAGGTGCCTCATACGCCCTCCAGTGTGCCGACACAACAA
CCCCAATATGCATTTATTTCACATTCCATCACCTCGTACCCGTCGAACGAGCCTCAGATT
GACAACGCACGGCTGGCGCGCCGAAAACGACGCCGAACGTCTCCCACGGAACTCGCGCTG
CTGGAGCAGGAGTTTGCCCGCAACCAGAAGCCTCCCAAGCACATTCGCGTCGACATTGCC
CGCCGAGTCGACATGACTGAAAAGGCTGTGCAGGTGTGGTTCCAGAACAAGCGGCAGAGC
GTGCGAAAGAGCATGAACAAGAGCATGACCGATGACACCTCTTTCGCCGACTCTTCGTTC
GCTGAAACTACCTTTGACGAGACAGACGGTAACTCCACATTCCTGTCCAATTCCAACGTC
AGCACCAGCGTAAGCAACAAGTCAATCACTTCTTCCATCACAGACAACAAGTCGCCCCTG
GCACAGTCAACCACCGCCGACTCTGTTGCCAACGCCAACGCCAACGCCAACGCCAACGCC
AACAACAACACCGCATCCACTTCCTCCACAAACGACTCCGAAATTGCATCCGTCGCCCCC
AAAACAAACGGCAGCTCATTCTCTGTTTTCGAAGATACCCCCGAGACTCCCGCGAAAAAG
AAACCCAGTGCTCCGCGACTGTCCATGCGTGGTGGGAAGGCTACTGTTATCTACGCCGGC
AAGCCCAAGGGTGTCACGCTGTCCTCGGGAAGACGTCTTGGGGTCCCTGCCACACCCTCC
TCTCCCGCCAACAACAATCTTGGCCTGGGAGGCTCGCCTCTGGCCACATCGTCTCCTATG
ACCCAGCGGACCGCGTCGCAACTGAACCAGGCATCTGCATCTTCTCCCCTATCGGCTGTT
AAGTCCAAGTCTTTTGGAACTGCCGAGGAAAGCCTGGCTGCGACGCTCAAGAAGCGGCTT
CCGTCCATGCACTACGACCTGCCCGTGACCAACAAGACGTCGTCTGTGCGCCATGGCGTG
AGCTCTCCCGTGGTCGACGCCGGCAGCCGTGAGGCCGAGTGTATTTCCAATCTCCTCTCT
CTTCGAAACGGAGGACGATGGTAAATATTTGATTTTATATATACGAAAGATCTAACATGT
TTTGGTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20449g_CDS-001

Protein length: 488 aa.
Product: Conserved hypothetical protein

>YALI0E20449g_CDS-001 MDLAKITDGFVKHETSSSSSSCSTTNTGPTPDLSPVTPSKECEKRPREDDPEESHDTSAG
ANSNNNASVSLMSTPEPKSSSPPGLSHFAHLMQKSDTMYRQNLNSDQYIYSDEEKENHKT
SGKPHTPQVPHTPSSVPTQQPQYAFISHSITSYPSNEPQIDNARLARRKRRRTSPTELAL
LEQEFARNQKPPKHIRVDIARRVDMTEKAVQVWFQNKRQSVRKSMNKSMTDDTSFADSSF
AETTFDETDGNSTFLSNSNVSTSVSNKSITSSITDNKSPLAQSTTADSVANANANANANA
NNNTASTSSTNDSEIASVAPKTNGSSFSVFEDTPETPAKKKPSAPRLSMRGGKATVIYAG
KPKGVTLSSGRRLGVPATPSSPANNNLGLGGSPLATSSPMTQRTASQLNQASASSPLSAV
KSKSFGTAEESLAATLKKRLPSMHYDLPVTNKTSSVRHGVSSPVVDAGSREAECISNLLS
LRNGGRW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG