YALI0E20185g

Overview

Description weakly similar to uniprot|M3AJA3 Pseudocercospora fijiensis glycoside hydrolase family 3 protein
Locus type CDS
Locus tag YALI0E20185g

Location

Species Yarrowia lipolytica Positions 2394733..2397365
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2633 (nuc.)
Previous locus YALI0E20163g Next locus YALI0E20207g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20185g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20185gYALI0E20185g_mRNA-001YALI0E20185g_CDS-001

Nucleotide sequence

 

>YALI0E20185g
ATGGAGGAATTATCGGAGGCGGAACGAAACCAAATCGGCCAGCTATTCATCTGTGGATTA
CGTAATGCGGAGCTCGACGAGGACATTGCCGAGCTAGTGCGCACCTTCAAGGTTGGCTCC
ATCCAGGTGAGCATCAAAAACTTACCTTCGGTGGACCAGGCACGCGAGCTCATCCGCGGC
GTGCAACAGCTGGCCTATGAAGCCGGTCACGAACAGCCCATGGCGATTTGCATCGACCAA
GAGGGCGGCATTCTCAACAACCTGAAAGGCGTGACCCAATTCCCATGCCAAATGGCTCTG
GCAGCCTCCAAAGACACCGATCTAGTGGAGGCGGTGGCCGAGGCGGCGGCTAAGGAGCTC
CTAGCCTGTGGAATCAACTTCATGTTTGCACCGTGTATGGACGTGCTCAAGTCGACGTCG
GCCAGTGCGGACTTCTTGCTGGGGACCCGTGCCTTTGGAGACGATCACGAAATTGTGTCT
CAATTCGGATGTGCTTTCCTTCGTGGACTGCAGAAACAAAACATGATGGCCTGTGGAAAA
CACTTTCCGGGCTACGGAACAGCCTCGCTGGACTCCATCTTGGGGGGAGTGCCTGTGGTC
TCGGATAATGAGCTCCAAATGCAGGCACAGGCGTTTGTGCCGTTTAAGGCGATCATCGAT
ATGGATTGTGATGCCATCATGGTGGGAGGATGTTCTGCTCCAGGTTTGGATCCTACCGAA
GCTCATGCTTGTTTGTCCTGGAAGATATGCACTGATATTCTTAGAGAACAGCTGGGATTC
AAGAACGTTATTGTTTCAGAGTGTCTGGAGATGGAGGCTCTTTACCAACAGGTTGGAGTG
AAACAAGGAACCGTCTCAGCAAAGCTGGCTGGCTGTGACATGATTTTGTGCTGCTCTTCG
TTCAAGTTGCAAAAGCAAGCCCTGGAAGGTCTATCAGGCGCCTATCTCGACGGACTTGTG
GAGCCCGAAAGCATCATGGCATCTGCTGAACGCGTTAGACACATGAAGTCTAGCAGGAAT
CTCACCTGGCAGAGTATTCTGGGAGAGAGACCGTTTGTGGCAGAGCTGTTGCAAGAACAC
AAACTGCTGTCTGCACGAGCGTACGAGTCGTGTGTGGCTATTGGCAGAGACTATCTTCAC
ATGATTCCTTTTTCCTTGAAACGCTCAGACACGATTCTACTGCTGACCCCGTTATGTGAA
TCCGACGACATTCACAGCGGCAGATGCACTCCAGCGCAAACAAACGGCAACGGAAACCCA
TCCAACGTGCGCTTGCTTCCTGGCGAAGCGACTTTTCAACATCTGGGAAAGACCATTGCC
TCATATCATACTGGAAAGACACTGCACACTTCGTATTCCCAAAACGGAATTATCAAGTTA
CACGAACAGCTGATAGCCAGAGCAACGGTTGTGATTCTGGTCAACACAACAGCCTACTCG
AACATGTATCAAACCTCGATAACAAAGTACGTGCAGCTTCTTTGTGACCAAAGACGTATT
CCGTTTGTACTGGTGGCTGCTTCAAGCCCCCATGACATGGCGTCCTCCAACCATACATCG
GATACAAAGACGTATGTCTGTGCGTTTGAATTTACCCCAGAAATGCAGGTCACATGTGCA
AAGGTCATGTTTGGTAAGCTTCCTGCGCTGGGAACTATCCCATTCTCTCACTTCTGGGGT
AGACAAAGGTCTGGTTCCAAGTCACTGAGTACTACGTCTACCAGAAAGACGTGGATGGTG
GAAACGTATGCTGGAGAGAACGTGCAACCTCTTTGGGATCTATGTTTCCCGAAACGAAAG
CTGCCAACCGAGGCGTTCTCCGTGTTAAATGATATCGACTGCTATGTGGTGAAAAACTCG
TCTACTGGAAAGCTGTATGGGTTCTGTGCGGCTCACAAGACCCAGGTTGCACTACTCATG
GTGGACCCGTCCAGACGGAAAATGGGCATAGCTGTGAGCCTGTACAAGCGAGTACAAAGA
GCCAAGGGCAGAAAGGACCCCTCTGCGGCTCAGCTGACCTCGTTTGGGTCGGTGCTTCCC
GCGTACTTTGCTGGTGCTACACCCGAGAGTCTGGCGTGGCTACAGAAGGTGGACCGGGCC
ATGATCTTTAGAGACAATGTGGTTGTTCTAGTGAACCAGAGGCTGCAGGACTTCCGAGTC
GATGCGGCTGTGATCCAGGAGCTGCAGCAGAACAACCTCCGGTTCTCCATAGCCAGTGTT
GCAGAAACAGACGCAAAAGACCTTCCGGAGGAGCTGAGAGAGTCGGATGCCTATGTGGCG
CAGTGTCTCAAGGATGGTTCGGTGGTGGGCTCGGTGGTGCTGTTCAATAAGGGTTCTTCC
ATAGCCCGGTGGCTGCCTTGGATCTATGAGTTTGGTCCGTCGGTGGGTGGCATGACCAGT
TTGCGGTGCGACTCTGATTTGATAATGCAAGGGCTTGTTTGCTGTGCTATGAGAAGCTTC
CGCATTGAGGGCTTTCAGACGGTGGTATTGGATCACATGAGTGTTGCTCAACGCGACAGT
CTTAGTGGGCTTGGCTTTTCTGTCTGGCGGGTGGAAGAGAAGTTCAGCCGGTAGCCCGCA
TCTATTGTATGTATTTGTATGGGTAGCGTAATGAAATAATGACGGCTTTCGCC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20185g_CDS-001

Protein length: 858 aa.
Product: Conserved hypothetical protein

>YALI0E20185g_CDS-001 MEELSEAERNQIGQLFICGLRNAELDEDIAELVRTFKVGSIQVSIKNLPSVDQARELIRG
VQQLAYEAGHEQPMAICIDQEGGILNNLKGVTQFPCQMALAASKDTDLVEAVAEAAAKEL
LACGINFMFAPCMDVLKSTSASADFLLGTRAFGDDHEIVSQFGCAFLRGLQKQNMMACGK
HFPGYGTASLDSILGGVPVVSDNELQMQAQAFVPFKAIIDMDCDAIMVGGCSAPGLDPTE
AHACLSWKICTDILREQLGFKNVIVSECLEMEALYQQVGVKQGTVSAKLAGCDMILCCSS
FKLQKQALEGLSGAYLDGLVEPESIMASAERVRHMKSSRNLTWQSILGERPFVAELLQEH
KLLSARAYESCVAIGRDYLHMIPFSLKRSDTILLLTPLCESDDIHSGRCTPAQTNGNGNP
SNVRLLPGEATFQHLGKTIASYHTGKTLHTSYSQNGIIKLHEQLIARATVVILVNTTAYS
NMYQTSITKYVQLLCDQRRIPFVLVAASSPHDMASSNHTSDTKTYVCAFEFTPEMQVTCA
KVMFGKLPALGTIPFSHFWGRQRSGSKSLSTTSTRKTWMVETYAGENVQPLWDLCFPKRK
LPTEAFSVLNDIDCYVVKNSSTGKLYGFCAAHKTQVALLMVDPSRRKMGIAVSLYKRVQR
AKGRKDPSAAQLTSFGSVLPAYFAGATPESLAWLQKVDRAMIFRDNVVVLVNQRLQDFRV
DAAVIQELQQNNLRFSIASVAETDAKDLPEELRESDAYVAQCLKDGSVVGSVVLFNKGSS
IARWLPWIYEFGPSVGGMTSLRCDSDLIMQGLVCCAMRSFRIEGFQTVVLDHMSVAQRDS
LSGLGFSVWRVEEKFSR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG