YALI0E20163g

Overview

Description similar to uniprot|G8YSQ7 Millerozyma farinosa Piso0_000565
Locus type CDS
Locus tag YALI0E20163g

Location

Species Yarrowia lipolytica Positions 2392718..2394050
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1333 (nuc.)
Previous locus YALI0E20141g Next locus YALI0E20185g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20163g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20163gYALI0E20163g_mRNA-001YALI0E20163g_CDS-001

Nucleotide sequence

 

>YALI0E20163g
ATGTCTTCACCTGCCTCCTTCTCCTTTGACTCCATGTCCTCTAGGTCGTCATACTCCCCC
AACCTGGTCAAGTTCACCAACTGCGTGCTGGTTGACGACGGACAGGAGTATGTGCAGGAC
CTGTGGGTCGACCTGGACCTCGGCCAGATTGTCGCTCCCGATGAGCAGCAATCTCCCCGA
GTCATTGACCTGGACGGCTGCTATCTGTCGCCTGGTTTCATCGACTTGCAAATCAACGGA
GCCTTCGGCTTCGACTTCTCCAAGATCCCCGAGAGCTCCGAGGAATACAAGGCCGGCATT
CTGGAGATGGAAAAGACGCTTCTGATGACCGGAACCACCGCCTACTGCCCAACTCTGCCT
TCCACCTACGCCAACGTCTACAAGCACGTTCTTCCTCTGCTGGCCCCCAACACCTCCCAG
GGTGCCGACAACATTGGTATTCACGTCGAGGGCCCCTTCATCTCGCCCCAGAAGCCCGGC
TGCCACCCCCAGGATGCCCTGCAGACCCCCCAGTCGGTCGAACACATGTACGAGACTTAC
GGTTCCAGGGAGAACCTCCAGAACGTCCGTGTCATCACACTGGCACCCGAGCTGCCCAAC
ATGCAGCAGTGCATCCCTAAGCTGAAGCAGGAGAACCCCCATCTGACCATCTCCATCGGC
CACACAACCTGCTCTTATGCCCATGCCAAGGAAGCCGCCCAGGGAGGAGCCTCCATGATC
ACCCATCTCTACAACGCCATGCTGCAACCCCACCACCGAGAAGCCGGTCTGTTTGGTCTT
ATCAAGACCCACGAGTGCCAGCAGCCCTCGTACGGACTGGTGGTCGACGGCATCCACGTG
CATCCCTCCTACGTGGCTATTGCCTACCACACCAACCCCGAAAAGTGTTTCTTGGTCACC
GATGCCATGTTTGCCATGGGTCTGGAAAATGGAATCCACCCCTGGGGCAACCAGGAGATT
GAGAAGCGGGGTGGCATCCTTACTCTCAAGGGCACCAAGACCATTGCCGGGGCTGCCACC
ACCCTTGACGAGTGTATTCGAAACCTCGTGCACTGGGCCCAGATTCCTCTGGCCAAGGCT
CTTCAGACCGTCACTGCCAACCCTGCCCGGGCCATTGGCGTCACCCACAAGGGCTACCTG
CGACCTGGCTGCGACGCTGACCTGGTTGTGCTCAACGCTGCTGGAGAGATCCAGTCCGTC
TTCAAGGGCGGTTACCAGGCCAAGTAGGGGAGGACGACACACGACGAGCACAGCATAAAA
CAGATAAATACTAACCATAGCCTTATTGTATAATAGACGATAAATGAATAATGATAGAGT
GACTAATCGTGTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20163g_CDS-001

Protein length: 409 aa.
Product: Conserved hypothetical protein

>YALI0E20163g_CDS-001 MSSPASFSFDSMSSRSSYSPNLVKFTNCVLVDDGQEYVQDLWVDLDLGQIVAPDEQQSPR
VIDLDGCYLSPGFIDLQINGAFGFDFSKIPESSEEYKAGILEMEKTLLMTGTTAYCPTLP
STYANVYKHVLPLLAPNTSQGADNIGIHVEGPFISPQKPGCHPQDALQTPQSVEHMYETY
GSRENLQNVRVITLAPELPNMQQCIPKLKQENPHLTISIGHTTCSYAHAKEAAQGGASMI
THLYNAMLQPHHREAGLFGLIKTHECQQPSYGLVVDGIHVHPSYVAIAYHTNPEKCFLVT
DAMFAMGLENGIHPWGNQEIEKRGGILTLKGTKTIAGAATTLDECIRNLVHWAQIPLAKA
LQTVTANPARAIGVTHKGYLRPGCDADLVVLNAAGEIQSVFKGGYQAK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG