YALI0E20053g

Overview

Description weakly similar to uniprot|Q99278 Saccharomyces cerevisiae YMR112c MED11 mediator complex
Locus type CDS
Locus tag YALI0E20053g

Location

Species Yarrowia lipolytica Positions 2384544..2385398
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 855 (nuc.)
Previous locus YALI0E20031g Next locus YALI0E20075r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20053g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20053gYALI0E20053g_mRNA-001YALI0E20053g_CDS-001

Nucleotide sequence

 

>YALI0E20053g
ATGGCGGACGAAGGCAAGAAGGAAGAACCGATTGCGGTGGGGGACGAGTCGATGGAGATT
GCGACGGAAACGCCGACGGGTGGAGCGCTCACTCTAGACGATAGCCACGCGACGGATCTG
GCGACCCTTCCTATGGGTCAAGACGAGGTGTCTGAGCGGCTGGAATCGCTACACAAGACG
GATATGAAGATTGCCAAGATGACAGAGACGCTGTCGAACGCGATTGATCTGCTGATTCCA
CGGTCAGAGCTGGATATCAACAGCTTTGAGCTCAAGGAGGGCGACAAGGGCTGGGAACCG
GGCATTCAACAGGGTCTGCCCTCTCTTAAATCTGCATTCAAGGTCAACTCCATTGAGTTC
CTACAGTCGCTGGAGGAGGTGTCGACAACACTGCGAAAGGAAATCAAGCGACTGAATGAT
TTTAGCCGCGACAAGGTGCTTCCCATTAACACGGACACCAAGGCCCAATGGACGTCATTG
GAGAACTACGACAAGATAATTAACCAGATCAAGGGCATGTTGGGGGCCGAGGACAAGGAT
AAAGAGATGAAGGATGTTTAGAATGGATACTGTAATGATAAATGATAGCATGTTGGGAAT
GAGACTATGGGCTGGCTGGTGCTGAGGTGCTGATCCGGGGGAAGTAAGGGCTTTCGTGAG
ATTGAACATACTGTTATACAGTCTCTGGCAAGAGTCTTTTCTTGAGAGGTATGCAGGACG
AACTGGTATCAGTACCAGTAGCCCAATGTATTTGACTGCTCCCCCTTCATGTGCTCACAC
TTTTGACATCCATTTATCATGTTCGAGTGAGAGACTTGGTGCAGTATGTAGCGTCTCTCC
ATGAAGATGATCGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20053g_CDS-001

Protein length: 187 aa.
Product: Conserved hypothetical protein

>YALI0E20053g_CDS-001 MADEGKKEEPIAVGDESMEIATETPTGGALTLDDSHATDLATLPMGQDEVSERLESLHKT
DMKIAKMTETLSNAIDLLIPRSELDINSFELKEGDKGWEPGIQQGLPSLKSAFKVNSIEF
LQSLEEVSTTLRKEIKRLNDFSRDKVLPINTDTKAQWTSLENYDKIINQIKGMLGAEDKD
KEMKDV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG