YALI0E20031g

Overview

Description similar to uniprot|P38011 Saccharomyces cerevisiae YMR116c ASC1 40S small subunit ribosomal protein
Locus type CDS
Locus tag YALI0E20031g

Location

Species Yarrowia lipolytica Positions 2381587..2383427
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1841 (nuc.)
Previous locus YALI0E20009g Next locus YALI0E20053g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20031g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20031gYALI0E20031g_mRNA-001YALI0E20031g_CDS-001

Nucleotide sequence

 

>YALI0E20031g
CTCACGGTCCAGTTAGCATAATACAACATGAGCCAGAACGTTCTTCTTGTTCTCCGAGGA
ACCCTTGAGGGTGAGTGCTACTGAAGGAGGGAACACAACGACGGAACAATTCGACTCTGA
AGGAATGATTGATTGGGGACTGGATGAATCAACGACAGAATCGACTGCTGGCACTGAAGG
AGGACAAATACGGGCGACAATGAACGGCTTTGATCTGTAAAGACAAGGCATTTTGAATGG
TTGAGAGCCATGATTGCTTCGAAAACACTTCTTTTTTCAGTCACTGTCAACTTGTTTGAT
TCGTCTTATTCACATACGTGGCCAGGCTTGGCGCAAACCTCCCCCGAAACTCCACTAACA
TAGGCCACAACGGCTGGGTTACCTCCCTCGCTACTTCTTCCAACAACCCCGACATTCTGC
TGTCCGGATCCCGAGACAAGTCCCTGATTGTCTGGTCTCTGACCCGAGACGACACCAACT
ACGGTGTTCCCCGAAAGTCTCTTAAGGGCCACTCCCACATTGTCCAGGACTGTGCCATCT
CTCATGACGGTGCTTACGCCATCTCCGGCTCTTGGGATAAGACTCTCCGAGTCTGGGACC
TGAAGACCGGTGTCTCCAAGGACCGATTTGTCGGCCACACTGGTGACGTTCTTTCCGTCT
CTTTCTCTCCCGACAACCGACAGATTGTCTCTGCCGGCCGAGACCGAACCATCAAGATCT
GGAACACCATCGGCGAGTGCAAGTACACCATCACCGACAAGGGCCATGAGGACTGGGTTT
CCACCGTCCGATTCAACCCCGCCACCAAGGACGAGGAGGAGCCCTCCCCCAACGCCAACA
CCATCATCTCTGCTGGCTGGGACAAGAAGGTCAAGGTGAGTATCAGACGACAAATACTAA
CAAGCAGAGCAGAGCGAAGCATAGCGCACATGTTGTGTAACCAAGGCTTTGCAACTTCAC
AAGTGATACCATTTTGGGCGTTCTGCCCCCAAACAGCATGATGATTTAACGGAAAAACAT
GAATATTTGCTACTTCAGAGCCCGAAAGGCTATGAGACAAAAATCCATATTATCTGATTT
GTTTGGACCTTTGTGGAGTTGAAATGTGTGCCACAACATATGCTGTGCTGAACAAGTTGG
GCTTGGTCTCTGGATGTTTTTGAGACTGTCTTCGACATCTTGATCATATCCTCAGGTCAC
TTTTGACAATCCCACGCTCTGGTACTGCTTGCATCCAGCTAGCTCATCGCTAGTGATACA
ATTGCACATACTAACTCAGGTCTGGGACCTCGATACCTGCACTCTCAAGGCTGACCACCT
CGGCCACACCGGATACGTGTCTACCATCACCATCTCCCCCGATGGATCCCTCTGCGCCTC
TGCCGGTAAGGACGGCTCTATCCTCCTGTGGGATCTGACCTCCTCCACCGCCCTCTACAC
CCTCCCTGCTGGTGATGAGGTCCACGCCGTGTGCTTCTCCCCCAACCGATACTGGCTCTG
CGCCGCCACCTCCTCCTCCATCAAGGTCTTCGACCTGGAGAAGCGAGTGCTGATTGACGA
GCTCAAGACCCAGACCACCTCCGAGGACGGTAAGGAGCCCGAGGCTCTGTCCCTCACCTG
GTCCGCTGACGGCCAGAACCTCTTTGCTGGTTACACTGACAACGTCATCCGAGTCTGGCA
GATCATGCAGTCTTCTTAAGTTACTTAGTTACTTAGGTCGTTGCGTAAAAATACTAAAAT
ACATGTATGATATGGATGTAGTCGACACCCACACCAGGACCTTGTCCGAGGGTTGTCGGC
GTATGTACTGTAATCGAATAATCTATCTATACAATGTACAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20031g_CDS-001

Protein length: 325 aa.
Product: G-protein beta subunit and guanine dissociation inhibitor for Gpa2p, putative

>YALI0E20031g_CDS-001 MSQNVLLVLRGTLEGHNGWVTSLATSSNNPDILLSGSRDKSLIVWSLTRDDTNYGVPRKS
LKGHSHIVQDCAISHDGAYAISGSWDKTLRVWDLKTGVSKDRFVGHTGDVLSVSFSPDNR
QIVSAGRDRTIKIWNTIGECKYTITDKGHEDWVSTVRFNPATKDEEEPSPNANTIISAGW
DKKVKVWDLDTCTLKADHLGHTGYVSTITISPDGSLCASAGKDGSILLWDLTSSTALYTL
PAGDEVHAVCFSPNRYWLCAATSSSIKVFDLEKRVLIDELKTQTTSEDGKEPEALSLTWS
ADGQNLFAGYTDNVIRVWQIMQSS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG