YALI0E19360g

Overview

Description highly similar to uniprot|P09733 Saccharomyces cerevisiae YML085C (ohnolog of YML124C) TUB1 alpha-1 tubulin
Locus type CDS
Locus tag YALI0E19360g

Location

Species Yarrowia lipolytica Positions 2309190..2310973
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1784 (nuc.)
Previous locus YALI0E19338g Next locus YALI0E19382g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19360g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19360gYALI0E19360g_mRNA-001YALI0E19360g_CDS-001

Nucleotide sequence

 

>YALI0E19360g
CCCTTTCCACCACACACAACTACACAATCATGAGAGAAGTCATCAGCATTAATGGTGAGT
ATGGCGATTAGCCGAATGGGCGTTTGCGGGCGCTCCAGGCGCGGTATCACGCGTTTTCTA
CGTCCACAAAGGTGGCAAAAAATACACAACAATAGGACGCATGTAAAACACGGCAACGGA
ACAACTGTTGATTTCGCAACATTCCATTGCAAAGAAGGAGAGCAAGATTGGGGAGATTTG
GAGGCGGATTGAAGGACGAATAATACTCAATGACGAATTCCCGACCGTCCCGAACCTTCC
AAATCGACGCTGTATCTAACGCCACCTCCATCGCGTTTCGTTTCCACCAGCCAGCCATCC
TCTCCCTCCCTACAACATCACAATACTAACCACAGTCGGTCAAGCCGGTTGCCAGATTGG
TAACTCGTGCTGGGAACTTTACTGCCTGGAACACGGTATCCAGCCCGATGGATACCTCGA
CCCCGACCGAAAGACGGGATCCCGGGAGGAGGGATTCTCCACCTTCTTCTCCGAGACTGG
CTCCGGCAAGTACGTGCCCCGAACCATCTACGTCGATCTCGAGCCCAATGTGGTCGATGA
GGTGCGAACCGGAAAGTACAAGAACCTGTTCCACCCCGAGCAACTCATCACTGGCAAGGA
GGACGCCGCTAACAACTACGCCCGAGGTCACTACACCGTTGGAAAGGAGCTGATCGACCA
GGTCATGGACCGAGTCCGACGAGTCGCCGACAACTGTAACGGTCTCCAGGGCTTCCTCTT
CACCCACTCTTTCGGTGGAGGAACCGGTTCCGGTTTCGGAGCTCTGCTGCTTGAGCGACT
CTCGGTCGACTTCCCCAAGAAGTCCAAGCTCGAGTTTGCCGTCTACCCTGCCCCCCAAGT
CTCCACCTCCGTTGTCGAACCTTACAACTCCGTCCTCACAACCCACACCACCCTGGAGCA
CTCTGACTGTACCTTCATGGTTGACAACGAGGCCATCTACGACATGTGCCGACGAAACCT
CGATATTTCGCGACCCTCCTTCGAGAACCTCAACAGAATGATCGCCCAGGTTGTTTCCTC
CGTCACCGCCTCTCTGCGATTCGACGGTTCTCTCAACGTCGACCTTAACGAGTTCCAGAC
CAACCTGGTTCCTTACCCCCGAATCCATTTCCCCCTGGTCACCTACGCCCCCGTCATCTC
CAAGTCGCGAGCCAACCACGAGTCCAACTCCGTCAACGAGATCACCAACGCCTGCTTCGA
GCCCAGCCACCAAATGGTCAAGTGCGACCTCCGAGAGGGTAAGTACATGGCCAACTGTCT
GCTGTACCGAGGAGACGTGGTCAACAAGGATGTACAGGCTGCCGTTGCCTCTATCAAGGC
CAAGAAGTCCATTCAGCTGGTCGACTGGTGTCCTACCGGTTTCAAGATTGGTATCTGCTA
CCAGCCTCCTCAGTACGTTCCTGAGGGCGACATGGCCAAGGTTGACCGAGCCGTGTGTAT
GCTGAGTAACACTACTGCTATTGCCGAGGCCTGGAAGCGACTTGATGCCAAGTTCGACCT
CATGTACTCCAAGCGAGCCTTTGTTCACTGGTACGTCTCTGAGGGTATGGAGGAGGGAGA
GTTCAGCGAGGCTCGAGAGGACCTGGCTGCTCTCGAGCGAGACTATGAGGAGGTTGGCGC
CGATTCCGCCTACGACGATGACCTTGAGGCTGAGTACTAAGCAGTTTGAGTTAAAGTGTA
CGAGCCTACTAATTAATTTAATGATACCGTGTTGATTGGAGTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E19360g_CDS-001

Protein length: 450 aa.
Product: Alpha-1 tubulin, putative

>YALI0E19360g_CDS-001 MREVISINVGQAGCQIGNSCWELYCLEHGIQPDGYLDPDRKTGSREEGFSTFFSETGSGK
YVPRTIYVDLEPNVVDEVRTGKYKNLFHPEQLITGKEDAANNYARGHYTVGKELIDQVMD
RVRRVADNCNGLQGFLFTHSFGGGTGSGFGALLLERLSVDFPKKSKLEFAVYPAPQVSTS
VVEPYNSVLTTHTTLEHSDCTFMVDNEAIYDMCRRNLDISRPSFENLNRMIAQVVSSVTA
SLRFDGSLNVDLNEFQTNLVPYPRIHFPLVTYAPVISKSRANHESNSVNEITNACFEPSH
QMVKCDLREGKYMANCLLYRGDVVNKDVQAAVASIKAKKSIQLVDWCPTGFKIGICYQPP
QYVPEGDMAKVDRAVCMLSNTTAIAEAWKRLDAKFDLMYSKRAFVHWYVSEGMEEGEFSE
AREDLAALERDYEEVGADSAYDDDLEAEY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG