YALI0E19250g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E19250g

Location

Species Yarrowia lipolytica Positions 2287874..2289539
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1666 (nuc.)
Previous locus YALI0E19228g Next locus YALI0E19272g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19250g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19250gYALI0E19250g_mRNA-001YALI0E19250g_CDS-001

Nucleotide sequence

 

>YALI0E19250g
ATGGTAGCTACACAACTGCTTCGTTTCCATGGGGAACTCCCCTCCTTGCAGTTTGAAGGG
TGGAGATCGAGGGTGGCAAGTGCGACCACAAGACACGGATCTCCACTTGACTCCGCGGCT
CCAGACGACCCCTCACAAGCTCCAGCCGCCGCCTCACAACATTTGATAGTCTCCCGCTCT
CGACCCTTGTCTTCCATCTGTCCGTCGCCGGTGCACGCCCGGCTGTCCAGACACGTTTCA
GGGCTGTGGAGATGGAGCCTGTACCGACTGATTAGATCCGAGGAACAACCAACACAACAA
GAGCCCCAATACGACCCCCAGGGCATACGCGCGTCGTCGGGACTCACGCTCGAGGCCGAG
GCGCGCATCAGAGAACTCAAGCGGGTTCTCAACCTGCCTGAAGACAGACCTCCCGTTCTG
GCCAACTACGACACAGAGGGGCCGGAACGCGGGGAGCAGGACTGGGAACACGTGTCTGAT
CACGACATTGAGAGTATCTTGGAAGTGGATTTGGAAAATGTCCTCGAACGTGTCACGGAG
CGATATCTCGGGGGCCCGCTCGAGGAGTCGCGAATTGTTGAGCTGGAGGGTGACTTGGAG
AACAACTCATCTCCCGACTCTGGAGAGGCTGCAAAAACACCGCCAACTAGGCAAGTGACC
CCTAAGCCAGATCCAAAGACTCCTAAACCGACACCAAGGACTTTGTGCACCCAAGACCAC
ACTCCCACAACTCCCACAACTCCCTCCTCAACACGTGACAATGTTCCCAGGACACATGCG
CCCAAGACGCCTCAAAGCGTACCACCTCAACGTGTCTCACCTCATCCCGTCTCTCAGTCA
TTAGCTCATCGCACGTCTCCCACCCAAGAACCTGTATCGGCCCTCGGCATGACACCCATG
AACATTCCAAAGACACCTCTGAAAGAGTCTTCAGCTATGAGAGTGTCTTCACCCGCACAG
CTGCCTCCTCTTTCGGGGATGAGACACACCACATCTCCAGGTGGTACCCAGGCCTCGACT
CCTTCAACTCCCCCTTCACAGCTTCGGGACAGCCTCAAGTCCACTCCTGTGAAAACCGTT
GCTACTCCTGTGTCAGCCTACAAGGCGCCAGTGAGATCTGTTCCTTCGACGCCCCACAAG
TCGCTGCCTTCACCTCCTTCTTCTCCCTTGGGCCAAGAACCGCAAGGGCCGTCTGCTTCT
CCCTCCACGCCCAAACAACAGCCTCAGCCGTTGCCCATGTCTCCAGGTAGGGAGGTGCTA
TCTCCCGGAAACCCGTTGACGCCGGGCACAAACACAGGAACAGATGCCACTCCTTTGTCT
CCCCGGACTCCGCTTTCGCCTCCGGTGGCTTTCCACAATCATCAATTGTCGCGGTCTGAG
TCTCATTCAGAGCTATTGGAACACGTGGAGCGGTTCAAGTCCGGGTCCATCCGGACGCTG
GAGGGGGTTCAGGCCGGACTCAACGGCCAGCCCGAGCAAACCAGTGAGCAGCAAGAGTCT
GAGTTAGCGCGGGTGTTTAAGCGTATCAGAGGACGAAGGGCTGTAATCACATAGCCGTCA
AGCCGGTATCATCAACAACAACGACAACTTTCGAGTACCTTCATACCATCACTATTTATA
CTCTTTATTTATACAGTTATTTATTTTAATGCATACTTAGATATTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E19250g_CDS-001

Protein length: 518 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E19250g_CDS-001 MVATQLLRFHGELPSLQFEGWRSRVASATTRHGSPLDSAAPDDPSQAPAAASQHLIVSRS
RPLSSICPSPVHARLSRHVSGLWRWSLYRLIRSEEQPTQQEPQYDPQGIRASSGLTLEAE
ARIRELKRVLNLPEDRPPVLANYDTEGPERGEQDWEHVSDHDIESILEVDLENVLERVTE
RYLGGPLEESRIVELEGDLENNSSPDSGEAAKTPPTRQVTPKPDPKTPKPTPRTLCTQDH
TPTTPTTPSSTRDNVPRTHAPKTPQSVPPQRVSPHPVSQSLAHRTSPTQEPVSALGMTPM
NIPKTPLKESSAMRVSSPAQLPPLSGMRHTTSPGGTQASTPSTPPSQLRDSLKSTPVKTV
ATPVSAYKAPVRSVPSTPHKSLPSPPSSPLGQEPQGPSASPSTPKQQPQPLPMSPGREVL
SPGNPLTPGTNTGTDATPLSPRTPLSPPVAFHNHQLSRSESHSELLEHVERFKSGSIRTL
EGVQAGLNGQPEQTSEQQESELARVFKRIRGRRAVIT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG