YALI0E19228g - STE50

Overview

Description uniprot|Q6C5C5 Yarrowia lipolytica YALI0E19228g STE50 Protein involved in mating response, putative
Locus type CDS
Gene name STE50
Locus tag YALI0E19228g

Location

Species Yarrowia lipolytica Positions 2285450..2286913
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1464 (nuc.)
Previous locus YALI0E19206g Next locus YALI0E19250g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19228g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19228gYALI0E19228g_mRNA-001YALI0E19228g_CDS-001

Nucleotide sequence

 

>YALI0E19228g
ATGCTATCACAGGCGTGGAACACGGACCAGGTGGGCCAGTGGATATCTTCGCTGGGGTTC
CCGCAATACTCAAAGTCGTTCATTGACAACAACATCACCGGCGACGTGCTGGTTCACCTC
GACCACGATGATATCAGCGACATTGGCGTGACGAAGATCGGTCACAGAGTGCTCATTCTC
AAAAGCATATACCAGTTGAAGGAGAAGGAGGGAGGCACATACGACAAGGATGGCGACGGA
GACGCCGGGGGCTACGTTCCTCCATCCATCAAAACCACCGATATAGACGACTACAACCGG
CTGTTCAAGAGCTTTGAGATCCGAGATGAGCGCGTGTACCACGTGGAGCAGGAGCTCAAG
AAGCTCATTGACTCTTTTAACAAGATCAGAGAAGACCTGCTTCCTCTGTTCAAGTTTGTC
AAGGAAAGCAAACCGCTGCCCACTCCTGATGGAACCAACCCCATCCATGCCCATTACTTA
CATTCGCCAGGAACCCCCAATGACGCTGCTGCTCCAAATACAGCCGCCAAAGAGCCAGGT
TCCGGGGCCAACAACCCGGGCCCTTCTATAGCCCGGAAGCTGAGCAAGTTGAACAACAAG
AGTGCCCAGAAGTCGCCCACAACTCTGGAACCCGAGTCTGCAGCAACAGCGAGCTCCTCC
GGAACTTCTGGACCCTCGGAACAGAAACGGCCGAATCTCTATCTCGGCTCAGTCAAGTCG
TTATTGTCTCCCTCAGACTCCTCGGTGGCTGCCACTCCCGTAGTTACGCCGGGGGGCTCT
ACCACCCTACACTTCTCCCATCCCTACCAGAGCGGGTCTGCCGCATCGTCACAAGTCAAC
TTCTCCAACACATCCTTGGTTTCGCCTGGGGCCCAGCCAAGCAGCACCAACGCACAACCC
ACCAGCACCAGCCAACCGGTTTCTAACAGCAGCCAGTCCACCAGCACTCTGGCGACAGAA
CCGTTCAAGTCGTTCCGAGTGACGCTAGACGACCCCTGCTACAAGGTGCTGCCGGCAGCT
CTACGACGATACAAGATCAACGGCGACTGGAAGCAGTATGCGCTGCTGGTGTGCTATGGA
GACCAGGAACGGCTTCTGGGGCTTGAGGAAAAACCGCTCATCATTTTCAAAGAGCTGCAA
GACGCCGGAAAACAGCCCGTCTTCATGCTACGCCATATCGAGGGCATGAAACAGACAGGC
GTCGTCGTAGGTACCCCTGGAGGTGTTCTATAGGAATATATTGCATGATACTGTACGTGC
GAGCTGGACGTGTACAAGAGATGTTTCTGAACTCGGCAATGTTCTAAAGTGTTGCAGCTG
TATCCATATACAGTACCCATATTGGCTGTGTACAGCATGCCATGGCTTGCTATCATGAGG
TAGAGAGCCATTGGTATCATAATACGAGTATTGCTTGTAATTGTATTTCCAATCATCTCC
TCAACCGGTAGTTGATGTAATGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E19228g_CDS-001

Protein length: 411 aa.
Product: Protein involved in mating response, putative
Gene: STE50

>YALI0E19228g_CDS-001 MLSQAWNTDQVGQWISSLGFPQYSKSFIDNNITGDVLVHLDHDDISDIGVTKIGHRVLIL
KSIYQLKEKEGGTYDKDGDGDAGGYVPPSIKTTDIDDYNRLFKSFEIRDERVYHVEQELK
KLIDSFNKIREDLLPLFKFVKESKPLPTPDGTNPIHAHYLHSPGTPNDAAAPNTAAKEPG
SGANNPGPSIARKLSKLNNKSAQKSPTTLEPESAATASSSGTSGPSEQKRPNLYLGSVKS
LLSPSDSSVAATPVVTPGGSTTLHFSHPYQSGSAASSQVNFSNTSLVSPGAQPSSTNAQP
TSTSQPVSNSSQSTSTLATEPFKSFRVTLDDPCYKVLPAALRRYKINGDWKQYALLVCYG
DQERLLGLEEKPLIIFKELQDAGKQPVFMLRHIEGMKQTGVVVGTPGGVL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG