YALI0E19162g

Overview

Description weakly similar to uniprot|D5G9I7 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0E19162g

Location

Species Yarrowia lipolytica Positions 2277085..2278335
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1251 (nuc.)
Previous locus YALI0E19140g Next locus YALI0E19167r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19162g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19162gYALI0E19162g_mRNA-001YALI0E19162g_CDS-001

Nucleotide sequence

 

>YALI0E19162g
ATGGCACATCCCTGCTTCGAACAGTACACACACATCACCATGTCGAGTCGTCCGGAAAAC
CTGGTGATTGTCAACGCGAATGCGGCCAGTGGGCGATCAAACACCATGGATGCCAAGAAA
CGCGTCTTAAAGCCACTTCCGCCAGTCTCGTCGTTCAAGTACAACTCCATTCTGGCGACA
TGTGAAACCGAGGCCCAGGACGTGACCGACTGTCTGCAACACATTGCTGCAAAGTACCAG
CATGATCTGTCATGCGAGGTGGACGAGGTGAAGAGGGCACAGGTCGAGCTGATTCGCCGA
ATGGGCGAAATTGACTCGCTTTTGGTCAACACGTCCACGCAGATCAACATCAACATCCAG
CAGTTCAGGACCTCCAAGAACACCCTCAAGTCGGTGGAAAACATTTCAACACAATGCGAA
CAGACCTACCATCGTTTGGACTCGATCATCAACCACCTGTTTTCGATCGAAGAAAAGCTA
CCTTCTTACGAGCGTCTAGGCCTGGAAAAGAGCCCCCATAAACAACATTACCCTGTGCTA
CATGAGTGGATGAGAGCAAATGACAGAGGCCCTTCTGCATCACCTTCTTCTCCACCAGGA
GACCAACAACAAGACATAACTAACCATCCATACCCCTCGCGTGACCCAAACAAAAGCACA
GACTCAATCTCTTCCCAGGTACCACTTTCAAAACTGCAAGAGAGATCGCTACAAACAGTC
CGATCACGCGACTCGACCTCTTCAGACCGACCGCCGCTATCAAAACAGTCGTCACGTGAG
TTCCTGCGTCCTGCCAGCAGCCAATCACGTGAATCACGTGAGTCTCTACGATCTCTGCGA
GACAACAGACGTGCTCTCAACACCAAAACATACCCCTCTCTCTACCCTCGGCCAATGATG
TCGCTCATGTCTTCCACCAGCAATGTGTCTACTACCATGAGTCCCATCGAGCCTCAGACG
CTGTTTGAAGAGGCTGTGGCCACCACTCGAGCTCCTAGACGCATGGTTTCAATGCAGAGC
ATTCAGAGTATGCAAAGTCTCAACTCCGGACAGTTGCCTCTCATGGAGGCAGACTCTGCG
TCTACGGTTTCGCGTGCTGCTACCATCAAATCCTCCTTTTCTTTCCGAGGAATCGCAGAC
TTCCTCAAGGGCTCGCCCAAGAAGAAAATGTCTGCCGAGCAGAGACTCAGAGGGTTTCTC
TAATATTTATTGTAACGACCTATGTAATAATACAAGCCCATATGACTACTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E19162g_CDS-001

Protein length: 401 aa.
Product: Conserved hypothetical protein

>YALI0E19162g_CDS-001 MAHPCFEQYTHITMSSRPENLVIVNANAASGRSNTMDAKKRVLKPLPPVSSFKYNSILAT
CETEAQDVTDCLQHIAAKYQHDLSCEVDEVKRAQVELIRRMGEIDSLLVNTSTQININIQ
QFRTSKNTLKSVENISTQCEQTYHRLDSIINHLFSIEEKLPSYERLGLEKSPHKQHYPVL
HEWMRANDRGPSASPSSPPGDQQQDITNHPYPSRDPNKSTDSISSQVPLSKLQERSLQTV
RSRDSTSSDRPPLSKQSSREFLRPASSQSRESRESLRSLRDNRRALNTKTYPSLYPRPMM
SLMSSTSNVSTTMSPIEPQTLFEEAVATTRAPRRMVSMQSIQSMQSLNSGQLPLMEADSA
STVSRAATIKSSFSFRGIADFLKGSPKKKMSAEQRLRGFL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG