YALI0E19140g

Overview

Description similar to uniprot|Q6CB78 Yarrowia lipolytica YALI0C21274g
Locus type CDS
Locus tag YALI0E19140g

Location

Species Yarrowia lipolytica Positions 2276569..2277090
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 522 (nuc.)
Previous locus YALI0E19096r Next locus YALI0E19162g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19140g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19140gYALI0E19140g_mRNA-001YALI0E19140g_CDS-001

Nucleotide sequence

 

>YALI0E19140g
ATGATCAAACAACTTTACATTTCTCTCATCTCAACCTTGGCTCTTGCCGGTACCCCTCCC
GTGGCCTGTGGCTCCTCAACTCCTTCTTTGAGCTACACTCTTGGTCTGCTTCTTCCTGGA
GCTAGTCAGTCTCAGACGCTTCAGATCCGAAGGGACCAAATCGTCTACGGTCTTAGTCAA
GGATTTTCCGACTTTGAGGTGACTTTTTCTGGCAACTTTGTCAACGTCATTTCTCCTGGT
TTCAACAACGAGCCCCGAGAACTATACTCTGAATGCGACGGAAAACTTCTAGTCAGTGAT
GTTGCTGCCCCTACTGTCTCCCAGGAAGGACGAAAAGGGACCTGGACTTTTGTTGGCGAA
GGAAACCAGCTGACTGTTCAGAACAACGGCGAGAGCATCTTCTACAGCTGCCCCAACCCC
AATGAACCTATCCGGGGTGGTCAACAGGTCTATGCCAAAACTGGTGACTCCTTTGCGTGT
CCTAACCCTGCTGTTGGCACTCTGGTGGCGATGAAAAAGTAG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E19140g_CDS-001

Protein length: 174 aa.
Product: Hypothetical protein of a 11-member gene family, conserved in the Yarrowia clade

>YALI0E19140g_CDS-001 MIKQLYISLISTLALAGTPPVACGSSTPSLSYTLGLLLPGASQSQTLQIRRDQIVYGLSQ
GFSDFEVTFSGNFVNVISPGFNNEPRELYSECDGKLLVSDVAAPTVSQEGRKGTWTFVGE
GNQLTVQNNGESIFYSCPNPNEPIRGGQQVYAKTGDSFACPNPAVGTLVAMKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG