| Description | similar to uniprot|P39940 Saccharomyces cerevisiae YER125W RSP5 Ubiquitin-protein ligase involved in ubiquitin-mediated protein degradation |
|---|---|
| Locus type | CDS |
| Locus tag | YALI0E18117g |
| Species | Yarrowia lipolytica | Positions | 2137120..2140403 |
|---|---|---|---|
| Strain | CLIB 122 | Strand | Antisense |
| Chromosome | YALI0E | Total length | 3284 (nuc.) |
| Previous locus | YALI0E18095g | Next locus | YALI0E18139g |
Here is a representation of the structure of the locus YALI0E18117g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :
By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.
>YALI0E18117g
ATGCCCAGGACAACCAAGCTAAGGCTGACGGGTGAGTATGAGCCGGTGGCGTTGCGCCAC
GGAGCGACTGTGGCAGTCAGTCAGGGACCAGTCAGGACCAACGGAACACTGGGTGGACAT
GGGACAGGGTGACACAGACAGAGAATGTCGCAGACAGAGAATGTCGCAGACACAAGGTGG
CACAGACAGAGAATGGCACAGACACAGTCCAATGGGAACGGTCCTCGGCCGAACGCCCCT
ATGACAACTGGCCTGATATCCATTCGGAGATACACAAACTCTGGACCGGAGATCGAGTCT
GTGCGACACCAGTGACGGTGCGGAGAGACCATGCTGAATGACGGTGACGAATGGCAAAGA
CCTACGATATGGAATGGCTAGGACGTCTTCAAGACTTGGTTTCCTCTGTGATCAGAGTGG
AGGAGTGTCTGGGTCAAATATGTTCTCAACGTCGTTGCCGTACGTTATTGTACATCATTG
TCATCAGTCGTTGCCATCGTTGCGTTGTATGGCAACGTTTCATATCATTGCATTGGTCGT
TGCCCGTCGTGCGACCTGGTATCCGGCCGTCGTGTGACCCGGTGTCCGGCCGTCGTGCGA
CCCGGTGTCCACTCGAGCCCTCGTAGCTCGCTGCACACGCTACTCTTCCAACCCCGCTAA
CACAGTCATCGCCGCAGACCAACTATACAAAAGAGATGTCTTCCGTCTCCCCGACCCCTT
CGCAGTGGTCCTCGTGGACGGCGGCCAAACCCGAACCACCTCCGTCATCAAGAAAACGCT
CAACCCCTACTGGAACGAGTCGTTCGACGTCGACGTTACCCCGTCGTCCATCATCGTTGT
GCAAATCTTTGACCACAAAAAGTTCAAAAAGAAGGACCAGGGCTTCCTCGGCGTCATCAA
CATCCGCGTGGGCGACGTGCTCAACCTGGCCCAAGGAGGAGACGAGATGATCACCAAGGA
CCTCCGCAAGGCCAACGACTCGCTCGTGGTCAACGGCAAGATCATCCTCAACCTCAGCAC
CAACACCGCCGGCCGACGCGCCACCGGCGCCTCCTCCGCGGCAGGCTCCACCGCCCCATC
CACCGCCTCCGTGTCTGCTGCTGCTCGCACCAACCTCCCCGACATTTCGTCCCTCAGCGT
CGACAACTCCAGCGTGCGAAGCAGCTCCACCTCGCACAGCGCCACCCCCTCGGCCACCAC
TAACAGCACATCGACCAGTGCGCTGAACGGGGCCAATAACACCACGGGCACTACAACCAC
CACAGGCCCCCCTGCCGGTGCACCCACCGCTACCACCACGTCCACGGCCGCACGCCCAGC
CCCCAACTCCCGGGGCTTCTCGTCCTTTGAGGATCAGTTTGGCCGGCTGCCCACCGGCTG
GGAGCGACGTACCGACAATCTGGGCCGAACGTACTACGTGGACCACAACAATCGCAGCAC
CACGTGGACCCGCCCGGCAAACTCGCAGAACGAGTCCGAGTCGCGCCAGGCCCGTCAGAA
CAACACTAACCTGGAGCGGCAGCGGCACCAGAACCGAACGCTGCCCGAGGAGCGGGCCCA
GTCGCCCACGCTCGGTTCCCACAACCGTACCGGCTCCGGCGCCACCGCAGGTTCGTCGTC
GGGAGCGGCGGGAGGAGGTGCAGCCGCCGGCGGTGTTGCAGCCACCTCCCCGGGTGGTAC
TCCCCGGTCTGCATCCGACGCCGTGGCCATGACCATGTCTGGAGCCACCACACCCGCACT
GGGCGAGCTGCCTGTCGGCTGGGAGCAGCGGTTCACACCCGAGGGACGGCCCTACTTTGT
GGACCACAACACACGAACTACAACCTGGGTCGACCCTCGGCGACAGCAGTACATTCGAAT
GTACGGCGGCACCAACGCCGCGGGGGGCACCAACACGACCGTGCAGCAAATGTCTGTGTC
CCATCTGGGTCCCCTTCCCTCCGGCTGGGAAATGCGGCTCACCAACACTGCTCGTGTGTA
CTTTGTGGACCACAACACCAAGACCACAACCTGGGAAGACCCACGGCTGCCCTCGTCGCT
TGACCAGAGCGTGCCGCAGTACAAGCGGGACTTCCGACGAAAGCTCATCTACTTCCGGTC
GCAGCCTGCTCTGCGAATTCTGCCTGGCCAGTGCCACATCAAGGTGCGGCGAGATCACAT
TTTTGAAGATTCATATCAGGAGATTATGCGGCAGACGCCACAGGATCTGCAGAAGCGACT
GATGATCAAGTTCGACGGCGAGGAGGGTCTGGATTACGGAGGAGTGTCGCGAGAGTTCTT
CTTTTTGCTGTCGCACGAAATGTTCAACCCCTTTTACTGTCTGTTTGAATACTCGGCGCA
CGACAACTACACTTTGCAGATCAACCCCCACAGTGGCATCAACCCCGAGCATCTCAACTA
CTTCAAGTTCATCGGTCGGTGCGTCGGTCTGGCCATTTTCCATCGTCGATTCCTTGACGC
CTTCTTCATTGGCGCCTTCTACAAGATGATTCTCAAGAAGAAGGTTATGCTGGAGGACAT
GGAGGGTGTGGACGCGGACTACCACCGAAACCTGGAGTGGGCGCTGGACAACGACATTAC
CGATGTGCTGGACCTGACCTTCAGCGTGGAGGACGACCAGTTTGGCGAGATTGTCACCAT
TGATCTCAAGCCCGACGGCCGAAACATTGAAGTGACCAACGATAACAAGATTGAATACGT
TGAGCTTGTGACCGAGTGGCGAATCAGCAAGCGTGTGGAGGAGCAGTTCCAGGCGTTTGT
GTCTGGATTCTACGAGCTCATCCCCCAGGAGCTGGTCAATGTGTTTGACGAGCGGGAGCT
GGAGCTGCTGATTGGAGGTATTGCCGACATTGACGTCGACGACTGGAAGAAGCACACCGA
TTACCGGGGCTACTCGGAGTCGGACGAGGTCATCAAGTGGTTCTGGCAGTGCATTAGATC
GTGGGACAGCGAGCAAAAGTCGCGGCTGCTGCAGTTCACGACCGGTACGTCGCGAATCCC
CGTCAACGGCTTCAAGGATCTGCAGGGCAGCGATGGTCCTCGCCGGTTCACGATTGAGAA
GGCTGGAGAGGCCCAGCATCTGCCCAAGTCGCATACCTGTTTCAACCGAGTCGATCTGCC
TCCGTACAAGAACTACGAGGATTTGGTCAAGAAGCTGTCCATGGCTGTGGAGGAGACTGT
TGGTTTCGGCCAGGAGTAAGCCGGGGAGACGGGACTGCGCAGTGCAGGTAGCATATACAT
TTTTATAACATGCTTGAGTGAGCTGAGTAAGGCGCGGTGAGTAT
Locus sequence
Up/downstream sequence
Protein length: 855 aa.
Product: E3 ubiquitin ligase of the NEDD4 family, putative
Browse the locus neighborhood with JBrowse:
ATG