YALI0E18095g

Overview

Description weakly similar to uniprot|Q09752 Schizosaccharomyces pombe Multidrug resistance protein fnx1
Locus type CDS
Locus tag YALI0E18095g

Location

Species Yarrowia lipolytica Positions 2134494..2136252
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1759 (nuc.)
Previous locus YALI0E18073g Next locus YALI0E18117g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18095g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18095gYALI0E18095g_mRNA-001YALI0E18095g_CDS-001

Nucleotide sequence

 

>YALI0E18095g
ATGTTACTCACTCTGATTGCGCTTTACACGGGCGTGTTTCTCAGCGCGCTGGACGCCACC
ATTGTCACCTCCATCTATGCGACGATTGCTTCTGATCTGAACGAGCTGTCGCGAATTTCG
TGGATCGCCACGGGCTACCTGGTTTCGTGCGCGGCGTTCCAGCCGCTGTATGGCCGTCTG
AGCGACATTTTCGGCCGAAAGGCCATGTTGCTGGTGTCGTCGGCCTGTTTTGGTGTCGGC
TGCACCCTGTGCGGTCTGTCGTACTCGCTCATGCCGCTGATTGTGGGCCGAGTGATTGCC
GGAATCGGCGGCGGTGGGCTTCTGACCGTCAGCACCATTGCCGTTTCCGATCTGATTCCG
CTGCGACAACGAGGAATCTACCAGGGCGTTGGAAACATTGCCTACGGTTCGGGCGCGGCG
ATCGGAGGAGCTCTGGGAGGCGTGCTGTCGCAGTGGATTGGTTGGAGAGGCGTGTTTCTC
ATCCAGGTGCCCTTTATTGTCTGCTCGGGCACGCTGGTGGTATTTGGAATGACCAACAGC
AATACCAAGAACCAGAAGCTCGACGATCCCGAGTCCGCCGACGAAAACGCCGACGAAAAC
ACCCCCGTTTCGCCCCTCACCACGTCGCCGGCGGACTCGGACGTGGCCAATCCTCTGTCC
GGAGCCAACTCGTCGGTTCTCTACGGATCCGTGGAGTCTGAAAATCTCCCACATGCCAAA
AGCACCGATTCTGACCCCACCGGCGAAACTACCTGGCAAAAGGTCAAGAACATCGACTTT
GCCGGCTCGGCTCTGCTGGTCACGTCGCTGTCGCTACTGCTGTTTGCCATTTCGTCCGCC
ACCAAGTCCGCCTGGACCGAACCCATCATCTACACCCCGCTGATCATCTCTGTGATTGCC
GGCGTGGTCTTCTGGAACTACGAGCTCAAGTGTGCCAACCCCGTGATTCCCGTGAGTCTT
CTCTATCGACAAACCATCTTTGCGTCGTCGCTCACCAACCTCTTTATGACCATGGGAATC
TTTGCCATGCTCTACAACGTGCCTCTGTGGTACAAGTCTGTGCTGGGCGATTCCGACGCC
AAAGCGGGCGCCCGGCTGGTGGGCAACTTCATCGGAGTCTCGTTTGGATCCATGTCGTCC
GGAATCTACATGCGAAAGACCGGAAAGTACTACAATCTGGGAATCGCCGCGGGAGTTCTC
ACCACCATGGGAGTCTTTGCGCTGATTCCTCTGTCGGCAGAAACCCCGGCCTGGCTACAA
TACACCATGCTGTTTGTTCCCGGAGCCGGCTATGCCGCCATGCTCACCGTTTCGCTGCTG
GCGCTAATTTCCGCGGTCTCGAACCAGGAACAGGCCACCGCAACCTCCATTCAATATGCC
TTCCGAGGCGTGGGATCCACTCTGGGTGTGTCGCTGTCCTCCACCATCTTCCAGGCGGTC
ATTTCCAAGTGGTTGCCGGTCAAAATGTACGCCGTGGTGGACAAGCCGACCCCCAAGGAG
GTGCGACTGATCGAGCTGACCATTGCCGCCGTCAAGGAGTCGGTGACCGCCATCCGAGAG
GCCCCCGCAAAGTTCCAGCCCGCCATCATCGCCTCCTACGACCTGGCCATCAAAGACGTG
TTTTTCTACGCCACCGCAATGTGCGCCATCAGCACCATTTGTTTGTATTTTGTCAAGGAG
CATGAGTTGAGACAATAGGTCTTAGAGTAATAGATTGGTAATGGAAGTACATGGATAGAA
TCTTCCGACTTCAGGTTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18095g_CDS-001

Protein length: 566 aa.
Product: Conserved hypothetical protein

>YALI0E18095g_CDS-001 MLLTLIALYTGVFLSALDATIVTSIYATIASDLNELSRISWIATGYLVSCAAFQPLYGRL
SDIFGRKAMLLVSSACFGVGCTLCGLSYSLMPLIVGRVIAGIGGGGLLTVSTIAVSDLIP
LRQRGIYQGVGNIAYGSGAAIGGALGGVLSQWIGWRGVFLIQVPFIVCSGTLVVFGMTNS
NTKNQKLDDPESADENADENTPVSPLTTSPADSDVANPLSGANSSVLYGSVESENLPHAK
STDSDPTGETTWQKVKNIDFAGSALLVTSLSLLLFAISSATKSAWTEPIIYTPLIISVIA
GVVFWNYELKCANPVIPVSLLYRQTIFASSLTNLFMTMGIFAMLYNVPLWYKSVLGDSDA
KAGARLVGNFIGVSFGSMSSGIYMRKTGKYYNLGIAAGVLTTMGVFALIPLSAETPAWLQ
YTMLFVPGAGYAAMLTVSLLALISAVSNQEQATATSIQYAFRGVGSTLGVSLSSTIFQAV
ISKWLPVKMYAVVDKPTPKEVRLIELTIAAVKESVTAIREAPAKFQPAIIASYDLAIKDV
FFYATAMCAISTICLYFVKEHELRQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG