YALI0E16995g

Overview

Description similar to uniprot|P15303 Saccharomyces cerevisiae YPR181c SEC23 component of COPII coat of ER-golgi vesicles
Locus type CDS
Locus tag YALI0E16995g

Location

Species Yarrowia lipolytica Positions 2012216..2015423
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 3208 (nuc.)
Previous locus YALI0E16973g Next locus YALI0E17017g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16995g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16995gYALI0E16995g_mRNA-001YALI0E16995g_CDS-001

Nucleotide sequence

 

>YALI0E16995g
ATGGTGAGTGTGACAAGGCGACGCGATGGGCGATGCTGGCGAACTGGGTTGATTTGATGA
CACAAACCGATGGCCGACACATGGCTCCGTGTCTCTTGCAAACCGACCAATCGAATCCCT
TAGTGTGGGGTTGATCGCCAATATGAAAAGACACGGGGGATGGATTTGATGAGCAACAAA
AGACACAGAAGAGATGGTGTGACACAGACGAAAGCAATGTGATTAGGACCTCTGGATGAC
GTGATCTTTGCGCCAGTGTTGCACTATTGAATCAGCCATTTTATCAACCGACTAGGACAG
GTATTCGTGTGCCCGTTACACGGTGTTTAGTACAAACATTGATGTGGCAGTTTGTGACAA
TGTTACAATTGTGTGACAAGTATACTGATTGTTTCTGTGTCAGCAGCTTGGAGCTGGTAC
GCTACGCTGTGTTTGTGTCCATGTGCTTTTCGTGGCCTACCTAACATCACGTAACGGTGT
CAGCTTGGCGCGCTGTTGTGCCGTGATTGCAACTACAGCTACTTGCTTCCGCTTGGATCC
AGGTGGTGTCTTCCACTGCGATGGCAAGTGACACGCATGGTCACGTCGCGCGTCGTCCTC
GACCTGCGGCTACTCCCGTTACCCGTTTCCGTTTCGTACTAACCCAGGACTTTGAAGAAT
TCGAAGAGAAGGACGGAGTGCGATTCTCCTGGAATTGCATTCCCTCTACCCGAATTGAGG
CTTCCAGAACCGTCGTTCCCATCTCGGCTCTGTACACTCCTCTGAAGGAGAAGCCCAACC
TCCCCGTACTGCAGTATGAGCCCATTGCATGCCGACCCCCCTGTCGAGCTGTGCTCAACT
CCTTCTGCCAGGTTGATCTGCGAGCCCGAGCCTGGGTCTGTCCTTTCTGTCTGTCTAGAA
ACCAGCTGCCTCCTCAGTACCGAGACATTACTCCCGAAAACTTGCCCCACGAGCTGCGAC
CCGAGTGCACCACTGTTGAGTACGTTCTGTCCCGACCTGCTCCCAACCCCATCTTCCTGT
TTGTGGTTGACACCTGTCTGGACGCCGAGAACCTGACTGCTCTCAAGGATCACCTTGTGG
CCACTCTTTCTCTGATCCCCGAGAACGCTCTCGTCGGTCTCATCACCTTTGGCGCCATGG
CTCAGGTCCACGAGATTGGCTACCGAGAGTGCGGCAAGAGCTTCGTCTTCCGAGGTAACC
GAGATTACACTGCGAAGCAGGTGCAGGAACAGCTGGGTCTCAACCAGCCTATTGGTCACC
GAGTCCCCCAACAGGGAGGACATCCCCAGGCCCAGGGAGCCGCTGCCCGGTTCCTCCTGC
CTCTGCAGAACGCCGAGTTCGCCCTCACCAACGTTCTGGAGGGTCTGCAGAAGGACCCCT
GGCCCGTGGCTGCCGACCGACGACCCATCCGATGTACCGGTGTGGCTCTCGGAATTGCTC
TCGGCCTGCTGGAGACTTCCTTTCCCAACTGCGGTGCACGAGTCATGCTGTTTGCTGGTG
GTGCCCCCACTGAGGGTCCTGGTATGATTGTGGGTCCCGAGCTCAAGGAGCCCATCCGAT
CTCACCACGAAATTGAAAAGGACACAGCCAAGCACTCCAAGGCTGCCACAAAGTTCTACG
AGGGTCTGGCCAAGCGAGCCACCACCCATGGCCAGGCCGTTGACATTTTCGCCGGTTGTT
ACGACCAGATTGGTATGCACGAGATGCGATCTCTGCCCAACTCCACCGGTGGAGCTCTTG
TGCTCTGCGATGCCTTCTCCACATCCATCTTCAAGTCCTCGCTGACCAAGATGTTTGCCC
GAGACGCCAACAACTTCCTCCAGATGGGTTTCAACGCCACCTTTGATGTCGTGCCCTCCA
AGGAGCTCAAGGTATCTGGTCTGATTGGCCACGCCGTTTCAATGAACAAGAAGAACCCCA
GTGTAGCTGACACCGAGATTGGTATTGGCCAGACTTCTTCGTGGAAGATGTGCTCCATCA
CTCCTGCTCACACCTACGCGACTTTTTTCGAAGTGGCCCAGCAGCAGGGCACTCCTGCAG
GCCAGATCCCCCCTGGATACGTGCAGTTCCTGACGCATTACCACCACTCGTCCACTCAGC
AACGTCTTCGTGTGACCACTGTTGCCAAGGCTCTTGTGCCCGGTGGCGATCCCCACATTG
CCAGCTCCTTTGACCAGGAGGCTGCTGCTGTGCTTATGACTCGAATTGCCATTTTCAAGT
CCGAGACCGAGGACGGCAACGACATTATGCGATGGACCGACAAGATGCTGATCCGTCTAT
GCCAAAAGTTTGCTGACTACAGAAAAGACGACGCGTCTTCGTTCCGACTCGCCCACAACT
TCTCGCTGTACCCCCAGTTTATGTTCCATCTACGACGATCGCAGTTCCTGCAGGTGTTCA
ACAACTCGCCCGATGAGACTGCCTTCTACCGACACTGCCTGAACCGAGAGAATCTCAACA
ACTCGCTTATCATGATCCAGCCCACCCTGCTGTCGTACTCTCTGGAGCAGGAGCAGCCCG
TGCCTGTACTGCTGGATTCGGTGTCCATCAAGCCCGATCACATTCTGCTGCTGGACACCT
TTTTCCACATTCTCATTTTCCACGGAGAAACCATTGCCAACTGGCGAAACCAGGGCTACC
AAGAAAAGGAGGAGTACGCCAACTTTGCTGAGCTTCTGCAGGCCCCTCGAATGGAGGTCC
AGGACTTGCTGGTTGACCGATTCCCTTTGCCTCGATTCATTGACACTGATGCTGGAGGTT
CCCAGGCCCGTTTCTTGCTGTCCAAGCTCAATCCCTCCAACACCCACCAGAGCGACAGTG
GCTACGGCACTCCTGGCAGCGCCGTGGTGCTTACTGACGATGTGTCTCTGCAGACTTTCA
TGTCTCATCTTCAGAAGTTGTCTGTGGCTGCCTCCTCTTAGGGTTAAGTAATGTTGTAAG
ATTAATTTGTATTGTTGGATTGTCGAGCTGGGAGTTATACAGTAGTGTCTATACACTGTA
TTGTCTCAAGTACACCACTCCCTTGCATGCGACCCCGTATCTTGCGTTAGTGAGACGTGG
TTGTACGATACAGTGGAATACATGTTCTTTGGAGCTAAAAAGTTTCAAGGGGGCACTGTA
TGAGCTGTGCGGGTGGGGTGATGATATGATATCGCGATAGCTGTGTAGATGCAATGTAAT
AACTCCTTGAATTGACTCAATTAAATGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16995g_CDS-001

Protein length: 759 aa.
Product: GTPase-activating protein, stimulates the GTPase activity of Sar1p, putative

>YALI0E16995g_CDS-001 MDFEEFEEKDGVRFSWNCIPSTRIEASRTVVPISALYTPLKEKPNLPVLQYEPIACRPPC
RAVLNSFCQVDLRARAWVCPFCLSRNQLPPQYRDITPENLPHELRPECTTVEYVLSRPAP
NPIFLFVVDTCLDAENLTALKDHLVATLSLIPENALVGLITFGAMAQVHEIGYRECGKSF
VFRGNRDYTAKQVQEQLGLNQPIGHRVPQQGGHPQAQGAAARFLLPLQNAEFALTNVLEG
LQKDPWPVAADRRPIRCTGVALGIALGLLETSFPNCGARVMLFAGGAPTEGPGMIVGPEL
KEPIRSHHEIEKDTAKHSKAATKFYEGLAKRATTHGQAVDIFAGCYDQIGMHEMRSLPNS
TGGALVLCDAFSTSIFKSSLTKMFARDANNFLQMGFNATFDVVPSKELKVSGLIGHAVSM
NKKNPSVADTEIGIGQTSSWKMCSITPAHTYATFFEVAQQQGTPAGQIPPGYVQFLTHYH
HSSTQQRLRVTTVAKALVPGGDPHIASSFDQEAAAVLMTRIAIFKSETEDGNDIMRWTDK
MLIRLCQKFADYRKDDASSFRLAHNFSLYPQFMFHLRRSQFLQVFNNSPDETAFYRHCLN
RENLNNSLIMIQPTLLSYSLEQEQPVPVLLDSVSIKPDHILLLDTFFHILIFHGETIANW
RNQGYQEKEEYANFAELLQAPRMEVQDLLVDRFPLPRFIDTDAGGSQARFLLSKLNPSNT
HQSDSGYGTPGSAVVLTDDVSLQTFMSHLQKLSVAASS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG