YALI0E16973g

Overview

Description some similarities with uniprot|P08153 Saccharomyces cerevisiae YDR146C (ohnolog of YLR131C) SWI5 transcription factor
Locus type CDS
Locus tag YALI0E16973g

Location

Species Yarrowia lipolytica Positions 2010932..2012231
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1300 (nuc.)
Previous locus YALI0E16951g Next locus YALI0E16995g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16973g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16973gYALI0E16973g_mRNA-001YALI0E16973g_CDS-001

Nucleotide sequence

 

>YALI0E16973g
ATGAACTTCGACTATGACTTTCTGCAGTCGCAGCAGAGTCTTCATATGAAGAAGGAGCAT
CATTCACAGCAGCATCAGAACCAGCAGTCGTCGGCCCAACCGCACCATCCCCACCAAGGA
TCACAGTACGATGTCAACTACCTGGACATTGGCTACAACGAGCTGGAGCCTCCGTCTACC
CCCCAGATGATGCCTACACAGACCAACAATGTGAGTCCCGACACCCTGGCGCGGTTCTCG
CGACTGCTCAACTTCTCCTCCACCACCCCCAGTCCCACCAAGCCGCTCAATGACCCCTCA
CAATCGGACATTTTCCTCCAGCAGCCCCCCACCATGTCGCTGATGGGAGCCATGTCTCCG
CCTCACTCGTCCCACCCTCCGGCTGCCGAGTTTGGCCATGCTCACTCGTCCCATCTTCAG
CAGAACCCCTTCCTGAACCCTCCCCAGCTCAACTACGATGCCGACGCTCTGGCCTACCTG
TCTCCCGAGCCAGGCTTCACTTCTCCTGAAATGGACAACTGGAACAACTACGAGTCTCCC
CATGACCACTCCTCTCCCGAGGGACCCCTTGGAGAACCCTTTGACGAGTACGGACTCGGA
ATCTCGTGGCTGCCCGTCGTCACCATCCCCGAAAACACAGAAACAGAGCAGATCATCGAA
CAGCAAAAGGTCTCCAACCAGCCTCAGCCTCGAAAGTCCGGCCTACCCCCCGGAAAACTC
GAGTCGTTCATTCATGGGCCCTGCGAAGACGGCAAGTTTCTGTGTCTGTACCCGGGCTGT
GGCAAGAAGTTTGGACGACGATACAACCTCTGTTCGCACATCCAGACCCACCTTGCAGAC
AGACCGTACTCGTGCTCGTCCTGTGAAGCCTCCTTCGTCAGACAGCACGATCTCAAGAGA
CACGAGCGCACCCACGCCGTAGTCAAGCCCCACATTTGTCCCTGCGGAAAGGGCTTCAAT
CGACCAGACGCCCTCAACCGACACAGAGCCCGACAGATCTGCTCTGGAGGCATCGAGGTA
CCTGGCCAACCCAAGCCATCGCCAGGCAAAAAGGGCCGACCCCGAAAGGTCGAACAACCG
ATCCAGATGGAACACTATGATTATGCACACACCTCTCCCGACTTTTCGTCTCCAGAGTAC
CACTCTTCACCGGACTTCGAAGGACATTAGGAAACAGTGAGATACAGAACGAGAAAGAGA
GAGAGAGAGAGCACTAACATATATTTATAATGTGGATTGGTTTTGTTTATATGCTTCATT
CCTTCATTCTATATACTATTTATTACATTTAATTGAGTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16973g_CDS-001

Protein length: 390 aa.
Product: Conserved hypothetical protein

>YALI0E16973g_CDS-001 MNFDYDFLQSQQSLHMKKEHHSQQHQNQQSSAQPHHPHQGSQYDVNYLDIGYNELEPPST
PQMMPTQTNNVSPDTLARFSRLLNFSSTTPSPTKPLNDPSQSDIFLQQPPTMSLMGAMSP
PHSSHPPAAEFGHAHSSHLQQNPFLNPPQLNYDADALAYLSPEPGFTSPEMDNWNNYESP
HDHSSPEGPLGEPFDEYGLGISWLPVVTIPENTETEQIIEQQKVSNQPQPRKSGLPPGKL
ESFIHGPCEDGKFLCLYPGCGKKFGRRYNLCSHIQTHLADRPYSCSSCEASFVRQHDLKR
HERTHAVVKPHICPCGKGFNRPDALNRHRARQICSGGIEVPGQPKPSPGKKGRPRKVEQP
IQMEHYDYAHTSPDFSSPEYHSSPDFEGH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG