YALI0E16731g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E16731g

Location

Species Yarrowia lipolytica Positions 1979332..1983023
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 3692 (nuc.)
Previous locus YALI0E16709g Next locus YALI0E16753g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16731g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16731gYALI0E16731g_mRNA-001YALI0E16731g_CDS-001

Nucleotide sequence

 

>YALI0E16731g
ATGAATACATCTGCAGAAGGAGCAGAGCAGGGCAGGCAAGATCCCCACTGGACGTCGAGG
ACGAGGATCTTTGGCATGGAGGACGGGTCCGAGTTCTGGAGTGGGTCAACCCTCACGCCC
ACCAAACATATTGACAAGGTGGTCTTTGGAAGCAACGCGGTCTGGCGCGCGTACGCAAAG
AGCCATGGAAAGGTTCTCTTGGTTGATCTGAGCTCCGGACGCCAGGATGGCCGGGAGTTC
CAACATTGTGTGAGCTTTGTTGCAAAGGACGAAGACGGCGACAATGCCTACCTCGCGTTT
GGATACATGCGAAACAAGACGATTGAGGACTTCATGTGGCTGTTTGATATGATCAAGGTC
CAGTTCAAACACCACTCGGTGCCTCTTCCCAAGACCATCTACTCCAGCGAGATGAAGGAG
TGCTACGAGACCATCGACCGAGCATTCCCCAACAGTAACATGCGGTTGTGGCTTCGAGAG
ATCAATCGGGACTTTGTAGCGCAGTGCCAGCATCTGGTGGTGCGTGACTCTGATCGAGTG
CTTCACGACAAGGTGGATCCTTCCAGTTTGACCAAGGACGAAAACATATGGCTTGAAATG
ATGTCCGACTGGTCGGAGATTCTGGAATCAGACAGCAAGAACCATTTCAAGGAACAATGG
GACGAGTTCCGCGCCACTTACAAGAAGAGCCACCCCGAAGTTGTTTCGTATCTCAGAAAC
CAATGGATCAAGCCGCACAAGCGCATCTTGACGGGCTTGTGGACAAACAATGAAGAGGGA
CATGTGTTTGATCAGAATGCATACATGGAGGGTGCTGCAAAGTTTTTGGAGAGAGCCGCG
GGCTGTCATGGCCTGGAAGACCGTCTGGTAGCTATTCAGACTGCCTACAGAGAAAATCAT
CTTACTGAGGGCAGCTCTGGAAAGCGACCAAGCGATGAGGATGAGTATCAGGAGGATGTT
GATGATGCAACAAGTAGAATTATGAGCATTCTTCGTGGAGGAGAGAACGAGGAGAAGTCC
GGAATCTCTGAGGACTCTGAGGAAGTGGAAGTAGTGGAGGATGGTGAGGAAGTGGACGAG
GGTGAGAAGCAGGAGGTTTCTGAAAAGGATACATCGGTAGAGGAGGAGGATTCTGAAGTG
AAAGAGGAGGAAGAGCATGAGGAGGCAGAAATGGAGGTATCTGAGGTGGGTTCTGAAGAG
GAGGACTCTGAAGAAGACTCTGCAGATGCCTACGAAGAGGAGAGGACTGACGAGTCGGGC
GAGAGTGATGTTGAAGACACAAAGAAATCTGCAACTCGGGCTGTGAAAACTGTGAACCAC
CCGACTACTCCTCGAAAAGCTACTGTACAAGCAGGCGCTCCAACCTTGATAGGTCACCTC
CCCCTCGCACTGGTTTCTCCTACAGCCACGACTTTGATGCCTCCCAGGATGACACCACTT
GGAGAGGTATTCCTTCACGTTCCGGGAATTGGCTATTTGCCTGAATGGCGTGCTCTAGAG
TTACAGAAAGAATTTGAAGAAGCTAAGAGAAAGCAGGATGCGGAGAGAGAGGAAGATGTG
GTGATGTTGGATGTCCATGACTTGGAAAAGGAAAAAGAGGAGGAAGAGGAGGATGAGGAG
GAAGAGGAGGAAGAGGAGGAAGAGGAAGAGGAAGAAAACTCTGGCTTTGATCCTGATTCT
GGTAAACCCTTGTCAGAGAGTGAAAGGGAGCGAATAAAGGCGGTCAGAAGAAATTTGCGT
CTGGAAGGATCCGGTACGGAACTTGAAAGGTTGCTAAATTCTAACAAGCGTTCAAGAAGT
GGGAGATCACGTCCATCTCTGGATGGAACCAGGAAGAGCATTACTGAGATCCCTAATGAA
GGGAAAGGCGGTGTTGCATCCGATACTTTTGTTGCAGATGTCGACGGGTCGTCAGCCAGC
AAACGATCGAGAAGAGGTCAGCAGCGAGCGTCTTCTACGGTTGCTACGCTAAAGACGCCC
AAACCCAAGAACAAGACTCAAGAAAAGAGTGCTGAGTCGGAGCAGCCTGTAAAGCGGGGA
CCAGGAAGGCCACGAAAACACCCTCTCGGTAAGGAGCCTAAGGCGGCTGTAATAAAGCGG
GGACCACGAGGGCCGTATAAAAAACGTGTCCTGTCCGCAGCTACGGTTTATGATTCTGAT
TCCGGGGATGCTGCCGAGCCGAAGACGTCTGGAATGAAAAGCTCTGACACTCCTACGAAA
TCCAGAGGTCGAACGCGAGCTGCACGACGTTCAACGATGGTTTCTGAGGATGAGGAAGAG
AAGGACAGGGAGAAGAAAGATTCAGTGAGAGATTCTCCTGCAGATACAGTGAGCTCTTCT
TCTGAGGACGAGCCTGTGGTGGCAGTTCCAAAGAAGAGTCCAAGGAGTATCAGCGTCAAC
CCCACCACCAAGCCTACCGCGAAGAAGACTACTGCAGCAGCCTCTAATTCCAAGTCATCT
CCCACCCAGACTAGAACTCGCAGATCGATGGCGTCAAAGGAGAACTCTACAGGAGTTTTA
ACAGAAACCCCCACCGCAGTTTCCAAGACGGTGACTCCACGAGTTGCTAGTGCAAAGTCG
ACACCGATACAAACCAGCCAGTCTCCCATCCAGACTAGAACTCGCAGATCGATGGCGTCA
AAGGAGAACTCTACAGGAGTTTCAACAGAAACCCCCACCGCAGTTTCCAAGACGGTGACT
CCACGAGTTGCTAGTGCAAAATCGACACCGATACAAACCAGCCAGTCTCCCATCCAGACT
AGAACTCGCAGATCGATGGCGTCAAAGGAGAACTCTACAGGAGTTTCAAAAGAAACCCCC
ACCGCAGTTTCCAAGACGGTGACTCCACGAGTTGCTAGTGCAAAGTCGACACCGATACAA
ACTAGCCAGTCTCCCATCCAGACTAGAACTCGCAGATCGATGGCGTCAAAGGAGAACTCT
ACAGGAGTTTCAAAAGAAACCCCCACCGCAGTTTCCAAGACGGTGACTCCACGAGTTGCT
AGTGCAAAGTCGACACCGATACAAACTAGCCAGTCTCCCATCCAGACTAGAACTCGCAGA
TCGATGGCGTCAAAGGAGAACTCTACAGGAGTTTCAAAAGAAACCCCCACCGCAGTTTCC
AAGACGGTGACTCCACGAGTTGCTAGTGCAAAGTCGACACCGATACAAACCAGCCAGCCC
ACATCAAACTCGACCTCAGGCACTTCGAGTTCCAAGCAGAATCGGTTGTCTTTTGCTTCC
AAGTCGACTCCAGGGCCCAAGAGGACCCCAGAGAATGCACCTTCGAATTCGACTCCAAAG
TCGTCTTCGCAGACTTCTTCGAAGACAGTCACTGAGTCACCTACTCAGAAGACTACACCA
AGGCCAGCTTCCAAGGCGACGTCCAAGGCGACGTCCAAGGCGACGTCCAACGGCACTCCG
AAGTCAGTCTCCTCCAAGACGACCCCCAAATCAACCCCGTCAGATTCCATGTCTCGGAAA
CGACCGACTGAGGAGGCTGGATCTGGGTCTGGCCGGAAGGGCAAGAAGCAGCGCAAGTCT
GATGTCACTCAGAACGGAGTGTCCAAGGCCGATACACCCACCAAGAGAAAAAACAGCCAG
TCTCGTCCTTCGCTGGGTCAGAGAATTTTGGGATTCTTCAAATAGCCACCCATTGTACGA
TATCATACTAATATTATTTGTAAATTATGTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16731g_CDS-001

Protein length: 1215 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E16731g_CDS-001 MNTSAEGAEQGRQDPHWTSRTRIFGMEDGSEFWSGSTLTPTKHIDKVVFGSNAVWRAYAK
SHGKVLLVDLSSGRQDGREFQHCVSFVAKDEDGDNAYLAFGYMRNKTIEDFMWLFDMIKV
QFKHHSVPLPKTIYSSEMKECYETIDRAFPNSNMRLWLREINRDFVAQCQHLVVRDSDRV
LHDKVDPSSLTKDENIWLEMMSDWSEILESDSKNHFKEQWDEFRATYKKSHPEVVSYLRN
QWIKPHKRILTGLWTNNEEGHVFDQNAYMEGAAKFLERAAGCHGLEDRLVAIQTAYRENH
LTEGSSGKRPSDEDEYQEDVDDATSRIMSILRGGENEEKSGISEDSEEVEVVEDGEEVDE
GEKQEVSEKDTSVEEEDSEVKEEEEHEEAEMEVSEVGSEEEDSEEDSADAYEEERTDESG
ESDVEDTKKSATRAVKTVNHPTTPRKATVQAGAPTLIGHLPLALVSPTATTLMPPRMTPL
GEVFLHVPGIGYLPEWRALELQKEFEEAKRKQDAEREEDVVMLDVHDLEKEKEEEEEDEE
EEEEEEEEEEEENSGFDPDSGKPLSESERERIKAVRRNLRLEGSGTELERLLNSNKRSRS
GRSRPSLDGTRKSITEIPNEGKGGVASDTFVADVDGSSASKRSRRGQQRASSTVATLKTP
KPKNKTQEKSAESEQPVKRGPGRPRKHPLGKEPKAAVIKRGPRGPYKKRVLSAATVYDSD
SGDAAEPKTSGMKSSDTPTKSRGRTRAARRSTMVSEDEEEKDREKKDSVRDSPADTVSSS
SEDEPVVAVPKKSPRSISVNPTTKPTAKKTTAAASNSKSSPTQTRTRRSMASKENSTGVL
TETPTAVSKTVTPRVASAKSTPIQTSQSPIQTRTRRSMASKENSTGVSTETPTAVSKTVT
PRVASAKSTPIQTSQSPIQTRTRRSMASKENSTGVSKETPTAVSKTVTPRVASAKSTPIQ
TSQSPIQTRTRRSMASKENSTGVSKETPTAVSKTVTPRVASAKSTPIQTSQSPIQTRTRR
SMASKENSTGVSKETPTAVSKTVTPRVASAKSTPIQTSQPTSNSTSGTSSSKQNRLSFAS
KSTPGPKRTPENAPSNSTPKSSSQTSSKTVTESPTQKTTPRPASKATSKATSKATSNGTP
KSVSSKTTPKSTPSDSMSRKRPTEEAGSGSGRKGKKQRKSDVTQNGVSKADTPTKRKNSQ
SRPSLGQRILGFFK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG