YALI0E16709g

Overview

Description similar to uniprot|Q01519 Saccharomyces cerevisiae YLR038c COX12 cytochrome-c oxidase, subunit VIB
Locus type CDS
Locus tag YALI0E16709g

Location

Species Yarrowia lipolytica Positions 1977609..1978158
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 550 (nuc.)
Previous locus YALI0E16687g Next locus YALI0E16731g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16709g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16709gYALI0E16709g_mRNA-001YALI0E16709g_CDS-001

Nucleotide sequence

 

>YALI0E16709g
TACAACTACACACAAAACAATGTCTGATACCGAAGAGCAGAAGGTTGTCTTTAAGACTGG
TGAGTACTGAGATGGCATGGATCAATGGGCGCGTCCAGATGGCCCAACGTTGATGTTTGG
CGACATTGAGCAAATTGAATCAGACACAAGCGACCAATGGACAACCGACATTTGGACAAC
CGACGCAAGCGACACAACCGACACAAAGCCGACGTGAGCGACACGAGCCAGGCAAGATGA
GCGGGTCAATCCATCAACCATTCAATCGCACATACTAACGCAGTCGGATTCGACCCCCGA
TTCCCCAACCAGAACCAGACCAAGCACTGCTGGCAAAACTACGTCGACTACTTCAAGTGC
ATCAACGCCAAGGGTGAGGAGTTTGAGCCTTGCAAGGTCTTCTGGCGATCATACAACTCT
CTGTGCCCCCAGGACTGGATTGAGAAGTGGGACGGCCAGCGAGAGAAGGGCAACTTTGCC
GGTGATCTTAACCCTTAAGCGGCATGTAATTTATGCATTGACAGTGTCTGTTTGAGTACA
CATGAGTGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16709g_CDS-001

Protein length: 85 aa.
Product: Subunit VIb of cytochrome c oxidase, putative

>YALI0E16709g_CDS-001 MSDTEEQKVVFKTVGFDPRFPNQNQTKHCWQNYVDYFKCINAKGEEFEPCKVFWRSYNSL
CPQDWIEKWDGQREKGNFAGDLNP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG