YALI0E16555g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E16555g

Location

Species Yarrowia lipolytica Positions 1959727..1961260
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1534 (nuc.)
Previous locus YALI0E16533g Next locus YALI0E16577g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16555g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16555gYALI0E16555g_mRNA-001YALI0E16555g_CDS-001

Nucleotide sequence

 

>YALI0E16555g
ATGAACCATGGAATCAGCCTGAAAATCATGCGGGCGTCGAAACCGCAGCTGACGCCGGCC
ATCCAAGACCCATTCGTGCTCTCGCAATCTCAATCGGCCGTTTTGAACCTGCCCTCACCA
TGGCTCAGCATCCGTCCAGCCTTTGGAACGGTCTACGTGGGAGAAGTGCTCACCTTCATG
GTCTACGTGAGTCTCAAGACGGACTTCATCTACAACACGGCTCCCAGCGTCAAGGTGGGC
GTGTCTGCGGCGATCCACGCCAAGGACTCCACCGAACCTCCCGTTCAAGTGCTCAACTCG
ACAGACACCGTGGAGCTCAACGAAATCCACCAGACGACACAGTTCCCCATCAAGTATGAG
ATCCCTACGGCAGGAATGCACACAGTCACCTGCCACGTGACCTACTCGTACGTGGTCGAC
GGAGAACCCCACCAGGAGTCCTTTTCAAAAATGTACCAGTTCAACGCCGTCAATTGCGTC
CAGTTGCAGCTGGAGACCATCAAGACCGCCAACAGACAACCGGCCATGCAGATAAAGGTC
GAGAATATCACCTCCAACAGTCTGTGGCTCAAGCCGCCGTCATTCTTCTCTGATTCCGTG
CAGCCCGTCGGATCCACCAAGACTGCTAACCTGCTGGGACCTGGAGACATGTGGCAATAC
TCGTGCAAGTACACAGGCGATCGACCGGCGTTTACCATTTTCTGGACACGAGGCCCAATG
GGTGAAAATGGGTGCTTGACTGTACAGTAGACGGCCTCACAAGTACTGCAAGGAAACGGA
GGTATGCATATGGAGAACGGGCAACTTGAAGAGGGGGCTAGGGTACAGAGGAAAGAATAC
TGAGTCTCTCGATACGTGCACAATGGAATATCAGCGGATTGCTACATGGTCGTTATTGTC
GAACCCCGCAGTTGCGAGATTGATTCTTGCAGTCGGATAAAGAAGTCTACTACTGGCAAT
GAGAGGAACATTCGAGATGAATAGATCTATGGACTGCACACTCCGAATGCTCTATCATAC
CAAAAATCGCGCGTCTGTTCTGCTACACAGATTAAGAACAAGGGCCTCTCATGTTCTGTT
GAGATCTGACCGAACCGTAGATTGAAGAGACACAGATACGGAGATCAGAATAATTATTTG
CGATACTGTCCATTGAATGGCTGGTAGAGTGGGGCCTTGTTGTTCACATTCCGGACAAGG
TAATGTAATCACGGCACAAGTACATAATATATCAGTCAGAATACTGATCTGATTGACAGT
TCATCTGCCATACTGCCGAGATAGGGGCTGTGGAACCGGCTGAACATTTGGACAATGGCC
TTGGGTCAAGGGCTGGCAGGCTGAGGTTTGATAGCTGCCTATTACACGAACCAAGCCCGT
TTCGCAATCCGGGCTCGTTTCACATCGATGAGGCCGTCGCCAAATAGCTTTCTTGCAGGG
ACGGCTGCCTTGGTACGGCGTTTGTCATGTATTGTTTGTTTAATACCACCTGCTGTCTGT
GTTTTATTAGTTGAAACCAGCTCCCTGTGTCACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16555g_CDS-001

Protein length: 250 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E16555g_CDS-001 MNHGISLKIMRASKPQLTPAIQDPFVLSQSQSAVLNLPSPWLSIRPAFGTVYVGEVLTFM
VYVSLKTDFIYNTAPSVKVGVSAAIHAKDSTEPPVQVLNSTDTVELNEIHQTTQFPIKYE
IPTAGMHTVTCHVTYSYVVDGEPHQESFSKMYQFNAVNCVQLQLETIKTANRQPAMQIKV
ENITSNSLWLKPPSFFSDSVQPVGSTKTANLLGPGDMWQYSCKYTGDRPAFTIFWTRGPM
GENGCLTVQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG