YALI0E16258g

Overview

Description weakly similar to uniprot|Q9UU96 Schizosaccharomyces pombe Hypothetical 83.3 kDa protein
Locus type CDS
Locus tag YALI0E16258g

Location

Species Yarrowia lipolytica Positions 1931585..1933453
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1869 (nuc.)
Previous locus YALI0E16236g Next locus YALI0E16280g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16258g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16258gYALI0E16258g_mRNA-001YALI0E16258g_CDS-001

Nucleotide sequence

 

>YALI0E16258g
ATGACGAAGCGGAAAAGTGCGTTGAGTGCGCTGAAGCCGACGAAAAAACAGGTCATCAGC
TCGGAGGATTCGGATCCCGAAGTCGTTGTGGTCACCAACCCTCCTCTGGACTCTCCGGAT
GCAGAGGAGTCGTTCATCAGCATCACCGAAGAAGATGAGGCCGTCAGACAGCTCAGCACT
TTTGATTTCAGTGCAAAGAACACCAAGGTGGTACGAGATGAGACTCGCGGTCGATCGCGA
GTTTTCCACGGCATGAAATTCAAAGAAACCATCGTTCTACGGGGAGCCTATGTAGTCACG
GTGTGGAGTGGAGTTATCCATATCAACGGAGCTCTGGTGAACATCAACTCTCCGGTCGAT
ATTCCCGTGTTTGCGCCCGCGTCTCACGCTCTTCCTCAAATCGAGGCTGCTGCTGGAGCT
CCCGAAACTCGAGAATCGGGGGACGAAGACGTCATGGAGGCATTGCATCAATTGGAGGGA
TCCTCGGTCATTGTGGAGATCGCAGCAATGCCGCGACGGTCAGAAAACCCGTTGATTACG
GTCAGCAACTTTGGGAAGATGTCCTCGGGCAACATTGTGCCGTTTGTGCGTCAATTGTGG
CACTGCTCTGAGGATGACGGCAGCAACTACAGCAGAATCTACAACACAGCCAGTGTAGTG
ACGAAATCGCAGGCAGCGGTCATTCCCGGCATCTATGACGAATGGGCCGAAGTGTGTGAC
GACATTCGGCGACTCAAGCACTCCTCCACCATGGTAGTGGGCTCTCAAAACACCGGCAAG
TCCACCTTTTGTAAATACTTGAGTGCGTTCATGACCACCAAAAAGACCGGCACCTCTGTG
GCGTTTGTGGATCTAGATCCTAGCAATTGCGAGTTCACTGCCCCCGGTCAGGTGTCTGTG
ACTGTTATTGGCGCAGGTCACCTTAGTCCCTATTCCATTCTGGGACCCTCCTTCACACAC
GTTACAGCCCCCACCTACAGTCGGTTTGTGGGTTACAACAACCCCAAAGATGACACCAGG
GGGTACATTGAGGCGTGTAAGGCAGTTATCGACTTCGCCAAGGGTCTCAAGCTGCCCCTG
GTGTTCAATACCTGCGGCTGGGTGCGTGCTGCGGGACACGATCTTCTGCGACAGCTCATA
GATCATGTGAAACCGTCAGACGTGGTGTTTACACGTGATCCCGGCGTCGACGCCGACCAG
GCGCGACTGGCTGAATCCGTCAAGGCCCGATCGCACGTTCTCGATGCTCCAGATGCAGAG
CCTCCACGTTTCACAGGTGCAGAACAACACTCGCTCCAGACTGTCACGTATCTGCACGGA
GGCAATCTTGCGTCTCATTTGAGCGACCTCCCGGCCCTCGAGGTGGGTCTGGAGTCTGTT
TACGTTGGTATTCTCGACTCTGAGGGCGTTGATCTGGCCGATGTGGCACTGTCTACCAAC
TCCACTCTTTTGGCCGTCATGACGATGGACAAGAAGACCGTCAAGCACGCGGAAATCACC
CCCGACGGACTCCAGTACCTGCCCAACTTTGACATTCCGCAGGGCGAGTGTCTTGGACAG
GCCATGGTGCAATTTGCAGGAGCTAGCGTCCGTTTGCATACCCCTGTATCAGCATCTCTG
CTCAACGCGCAGCTTGCAGCCGATAAGGCCATTGTGCTGGTCCGAGGACGTATTCCCCTG
CCTGTCTACGAGCTGTGGGACTCTCGAAAGGGTGGAGAACAGGCCTACGTCTCTTTCGAC
GTGAACAGCGGAGTTGGTTCCGAGGCTTGGGTAGCTAGACGTGGACTTAAGCGCAAGTGA
TGCATTTGCAATTGGATTCTACCGCTATGTACCGGTACATGTTACACTAATAGAACTAAT
AGATCATTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16258g_CDS-001

Protein length: 600 aa.
Product: Conserved hypothetical protein

>YALI0E16258g_CDS-001 MTKRKSALSALKPTKKQVISSEDSDPEVVVVTNPPLDSPDAEESFISITEEDEAVRQLST
FDFSAKNTKVVRDETRGRSRVFHGMKFKETIVLRGAYVVTVWSGVIHINGALVNINSPVD
IPVFAPASHALPQIEAAAGAPETRESGDEDVMEALHQLEGSSVIVEIAAMPRRSENPLIT
VSNFGKMSSGNIVPFVRQLWHCSEDDGSNYSRIYNTASVVTKSQAAVIPGIYDEWAEVCD
DIRRLKHSSTMVVGSQNTGKSTFCKYLSAFMTTKKTGTSVAFVDLDPSNCEFTAPGQVSV
TVIGAGHLSPYSILGPSFTHVTAPTYSRFVGYNNPKDDTRGYIEACKAVIDFAKGLKLPL
VFNTCGWVRAAGHDLLRQLIDHVKPSDVVFTRDPGVDADQARLAESVKARSHVLDAPDAE
PPRFTGAEQHSLQTVTYLHGGNLASHLSDLPALEVGLESVYVGILDSEGVDLADVALSTN
STLLAVMTMDKKTVKHAEITPDGLQYLPNFDIPQGECLGQAMVQFAGASVRLHTPVSASL
LNAQLAADKAIVLVRGRIPLPVYELWDSRKGGEQAYVSFDVNSGVGSEAWVARRGLKRK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG