YALI0E16236g

Overview

Description some similarities with uniprot|P43079 Candida albicans CaCPH1 Transcription factor
Locus type CDS
Locus tag YALI0E16236g

Location

Species Yarrowia lipolytica Positions 1925799..1928380
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2582 (nuc.)
Previous locus YALI0E16214g Next locus YALI0E16258g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16236g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16236gYALI0E16236g_mRNA-001YALI0E16236g_CDS-001

Nucleotide sequence

 

>YALI0E16236g
ATGTCTTCAATCAGAGATATGCTGCCCCAGCTGGCACGCGATGCCCTTGCTCAGGTCGAC
GACAGTGAGTAGCAGTAGTAGAGAGAGGGAGAGAGAGGTATGGGATCCGGGCACGCGTTT
GTGCTCGACGGTGGTGCCTGACGACTTGCAAGTGATGGGGACGGCATGGAGACCGGAACA
GGGTGTTGGTAAGCCCAGATACACCTCCCTCAGCCATTACCATACCCCCCAGACACGTGT
GATGACTCCCAACCCAGGCTGTTACATGTATGAAACAGACCCTGTGACAGGTTGCACGCG
GTTGCAACGGACCACCACAATTGGAAGAGGCGGGATTATTGAGGGAAATCGGGGTATTGT
GACACTCTCTCAAGGCCATTCTTGTGAAATACTAACCTAGTGAAATTTTTTCTGGCGACC
GCACCGGCAAACTGGCAGCCGGGCCAAATTATCCGGCGCTACTACCTGCCCACCGAGGAG
TTCATCAGCTGCGTGCTCTGGAAGGGCCTCTATCATATCACAGGAACAGACATTGTTCGA
TGCATCAGCTTCCGGTTCGAGGCGTTTGGACGGTCGATAAAAAACCGCAAAAAGTTCGAA
GAGGGCATTTTCTCCGATCTGCGCGGTCTCAAGTGCAACAGCGACGCCGTGCTCGAGTCG
CCCAAATCGCCGTTCCTCGAGTTTCTGTACAAAAACAGCTGCATTCGAACACAAAAGAAA
CAAAAGGTCTACTACTGGTTCAGCGTGCCCCACGACCGGCTGTTCGTCGATGCTCTGGAA
CGAGACATGCGACGGGAGCTTAACAACCTAGAACCCACGACCGAAGCTCACGCCGAGCCC
GCTAAGAGCTTCAACTTTGATCTCAACGAAAGTCTCTATGAGCAGCTTATGAAGGTGACC
AACGGAGACGGGATGCCAGCGGTGGGCTCTCTTCCCGGAGGAGGACATAGTGGACAACAG
GCGGGACCTTCCGCCAGTGGAGTTGGAGGTGCAGGAGGCCCAGGTGATGCTCCAGGCAGT
GGTCCAGGTGGTATAGTGACCGACTCTGCGCCTCCGGAGGGCCAAACCCAGGGTGGCGGC
CCCACTGGGCAGATTGCATCTCAGACGGTGGCCAACCAGAGTGCGTATGCACTGAGCGAT
TACCTGAGCACGCCAACAGAGTACCTCACATCCATGCAGCAGCAGCTGCAGAACCAGATC
CAGCTCAACCAGCAGCAGATGGCCAGCAACCCCGAGTATAATCAGATGGTGCAGCTAGGC
GGGTCCATTTTGCATGGCCAGCAGTCGCATCCGCCGCATCCTCAGAATCCTCAGAATCCG
CAGCACGCTCAGTCTCAGCAACAACTCCCGCAGCAGCAGCAGCTACCCCAAAAGATCAAG
GACGAAAACGACGATTCTCAATCTTCCGATTTCCCGCTCGACTACTTCCCACCTTCAAAC
CCCATGGATATGCCGTATCTGGACTCGCTGTATGAGCAGGCCCCTTTGTCGGCGACATAT
GCGGCTTTCCCGTTTGATCAGAGTATGAACGCCGCCACGGCTCTGATGTCACAGCAGCAG
GGCCAACCGACGCCCTCGACACAGGCTGCACATCCGGGTTCCAACGCCTCAGCGGCACCT
AACAACAAGCAGTACCCATCATCAATCATCCCGGACTACCCGGACTACGAGCTGGAGCAC
CAGACGTACATCATCAACGGCAAGGTGATCCATGGAACGGACTACCGGCAGAACATGGTG
ATCAAGACGCCGCTATTCTGGGACTTTGTGGAAGGCAAAGATGGCCAGGGACCCCAGCAG
CCGGCTCTACCTCCTTCCTCACAGTCCCAGCAGTCGATCCACGACTCTTCGGACGAATCC
GAGTCCAAGAAACGGACGAGTTCAGAGTTTGAGCGAGACGAGCGGGGCGTCAAGCGGGCC
AAGAGTGGTCTTTTTGAAAAGCCAGACTCCGACGGCCCCCCAAACAACATCACACAGTCG
GATTCTGCGTCTATTTCTGTGCCTGCCTCTGTGCACGACGAAAACAACGAGTCGTACATG
TTGCAGTCGGGTCCTCCGGTTTCCGAGGTGCCCAAGTCATACAGAAACACGTCGTTGGCG
GCTTCTCTGGCTCGCAACGGCATCACTAAAAAGGGCAAGGTTCCGCCGCCTCTGAGTCTG
GCCAAACCCGGCATGGCGCCTCAGCCGGTGTATCAAGGAGGAGTAGGAGGAGGACATCAT
GGTCATGTGGGGCATGGAGGTACCCATTCGGGCCCCCACGAGTCTGCCGGCACATCCGAG
TATTCCACCATCATTGGAGAAGATGGACTTCCTCACTACGTTCAGAGGGAGTAGAGGGAT
GCTGGAGTATAGGCGGTGGATGGCCACATTCAGATTGTATTTATAGGTGTATGCTTAATC
ATAATTGTTGGATGGTGTGGACGTGAGTGTGATTGAAATGTGATCTTGCCACCAGTACCT
TCATAGCCGCGGGACGCTTGTGTCATAATCATCATAATTACATCCTGGCGACCACTTGGT
TTGATATTATTACAGAATATAAGGCTACTTGTAGTTCGGGAGGTAAGGGCTACAAGGATG
TG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16236g_CDS-001

Protein length: 666 aa.
Product: Conserved hypothetical protein

>YALI0E16236g_CDS-001 MSSIRDMLPQLARDALAQVDDMKFFLATAPANWQPGQIIRRYYLPTEEFISCVLWKGLYH
ITGTDIVRCISFRFEAFGRSIKNRKKFEEGIFSDLRGLKCNSDAVLESPKSPFLEFLYKN
SCIRTQKKQKVYYWFSVPHDRLFVDALERDMRRELNNLEPTTEAHAEPAKSFNFDLNESL
YEQLMKVTNGDGMPAVGSLPGGGHSGQQAGPSASGVGGAGGPGDAPGSGPGGIVTDSAPP
EGQTQGGGPTGQIASQTVANQSAYALSDYLSTPTEYLTSMQQQLQNQIQLNQQQMASNPE
YNQMVQLGGSILHGQQSHPPHPQNPQNPQHAQSQQQLPQQQQLPQKIKDENDDSQSSDFP
LDYFPPSNPMDMPYLDSLYEQAPLSATYAAFPFDQSMNAATALMSQQQGQPTPSTQAAHP
GSNASAAPNNKQYPSSIIPDYPDYELEHQTYIINGKVIHGTDYRQNMVIKTPLFWDFVEG
KDGQGPQQPALPPSSQSQQSIHDSSDESESKKRTSSEFERDERGVKRAKSGLFEKPDSDG
PPNNITQSDSASISVPASVHDENNESYMLQSGPPVSEVPKSYRNTSLAASLARNGITKKG
KVPPPLSLAKPGMAPQPVYQGGVGGGHHGHVGHGGTHSGPHESAGTSEYSTIIGEDGLPH
YVQRE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG