YALI0E16148g

Overview

Description weakly similar to uniprot|G3AP99 Spathaspora passalidarum hypothetical protein SPAPADRAFT_56069
Locus type CDS
Locus tag YALI0E16148g

Location

Species Yarrowia lipolytica Positions 1919225..1920235
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1011 (nuc.)
Previous locus YALI0E16126g Next locus YALI0E16159g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16148g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16148gYALI0E16148g_mRNA-001YALI0E16148g_CDS-001

Nucleotide sequence

 

>YALI0E16148g
ATGCTCAAAGTGCCCGCTCCAATCAAAACATTCTTCGACGCGTTCCCGCTGGAGAAATTG
CCGCCGCTGGAGGTGTCGGAAACCGACTCCAACGCCTGCCAGGTGGTTGGAGGCGGATCA
ACACAATCCCCGGACTTTTACCTGTACACGTACGGACACAAAAATGGTGTGGGAACGACG
CTGAGCACGGAACCAACATCGCTGGCGGTGCAATTGTTGCTGTCACATTTCCACCCCAAG
AAATCCACACAGCTCGCCACAGTATCTCACCTGGCCAACATGGACGGCAAACTGCCTCTA
TTGGTCCAGCAGCCCTCCAACCGCACCTTTCTCACCTTCAACTCCATCTACAAGAACCTG
GTGCCATTGACCCCGCAAATCAACGTGCTCAGCTCGCTGGTCTTCCACAACCTGTACCAT
GCGTGGATCGTGACCATTCTGGACCCAGCATACTCCCGGCAGTTTGAAAACACATTTCTG
AGCGTCAAGTCACTCGAGTCCAATACCGAGGCCCGGTTCGTCGAGCCTCTCAAAATCAGA
TTCATGCAGGATCTCATCACCGACCACAAGAACCTCGCCACCGCCATGGAACAGAGCACC
CGACTACCAACCCGGCTAGTCATGTCCATGGAGTCGGTGTACGACAGCCATCCCGAGATT
GAAGAGATTTACTGCCGGGCGCACGACGCTCTGACCGCCTTTTCGAAACTGCTGGCCGAA
AGCCCCTCCCAGTTCTTCAACGCCAAGGACAAGGGCTTTGAGCAGAGCGAAATCGGCTCT
CTGGACTGTGTGGTGGCCGCCTTTATCTACTCGCTACGGCCCGAGTCTCCCTTTGGCCAG
ACTCGCCTGGGACACATGGTCCAGGATTTCCCCGATCTCAGCAGCCATGCCGTCAGTGTT
ATCGAGGAGGTCTACAAGAAGAATTAATGTACATAGATTTATACAAGCGGAGAGAGAGCG
ATATCATCAAAAACATACAAGATTGAATAAATACATTATTACGTCAGTGTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16148g_CDS-001

Protein length: 309 aa.
Product: Conserved hypothetical protein

>YALI0E16148g_CDS-001 MLKVPAPIKTFFDAFPLEKLPPLEVSETDSNACQVVGGGSTQSPDFYLYTYGHKNGVGTT
LSTEPTSLAVQLLLSHFHPKKSTQLATVSHLANMDGKLPLLVQQPSNRTFLTFNSIYKNL
VPLTPQINVLSSLVFHNLYHAWIVTILDPAYSRQFENTFLSVKSLESNTEARFVEPLKIR
FMQDLITDHKNLATAMEQSTRLPTRLVMSMESVYDSHPEIEEIYCRAHDALTAFSKLLAE
SPSQFFNAKDKGFEQSEIGSLDCVVAAFIYSLRPESPFGQTRLGHMVQDFPDLSSHAVSV
IEEVYKKN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG