YALI0E16126g

Overview

Description weakly similar to uniprot|P32317 Saccharomyces cerevisiae YEL052w AFG1 ATPase family gene
Locus type CDS
Locus tag YALI0E16126g

Location

Species Yarrowia lipolytica Positions 1917053..1919013
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1961 (nuc.)
Previous locus YALI0E16082r Next locus YALI0E16148g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16126g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16126gYALI0E16126g_mRNA-001YALI0E16126g_CDS-001

Nucleotide sequence

 

>YALI0E16126g
ATGAACCTACGACTAAGAACTCTCGGGCGAACGGCGGTGGTGCGCGCGACTCTGCGAAAC
ACCAGCTCGCTCAGATACTCGTCGCTCCGGTACAGCTCACAATTGGCGCTGACAGACCCG
CTGCACATCTACCAGAACAAGGTGGCCAGTGGGGAGCTCAAGGCGGATGAGGCGCAACTG
CGGGTGGCGGCAGAGCTCCAGAAACTGTACCACCGGCTCAAGGACTACACTCCTCCACAG
GACTTTCAGCGGAAGGTGTCTGCCCTTCAGGCGCAACTTTTGGAGATTGAGAAGGAGGCG
GCCGGGGAAGACATGACCAACTCGCAGATCAAGAAAAAGGCGGTCAGGCCGTGGTACAAG
CCGGATCTCAAGTCTATGGAGATGGTCAAGACTCTGACCGACGAGGAGGAGCTCATCAAC
TTCAACTCGCCCCAGGGTCTGCTGATTCACGGAGAAGTGGGCTGTGGCAAGAGTATGCTG
ATGGACATGTTTGCCGACTCGTTGCCCCACCAGTCCAAGAAGCGAATCCATTACAACAAC
TTCATGTTGTCGCTGTATGGAAGTATCCATCGGTTGACCCAAGAACGACAAGACCGACTG
CGATCTGCTGAGACTCTTCTTGGCAAGGAATCTGAGGCGCTTCTGACAGATTATATTCTG
CTGGAATTAGCCCAGGATATGATTGACAACCACACCGTTCTATTGCTGGACGAATTCATG
TTGCCCGACATGGCAGCCGCCAAGATTGTCAAGACGCTCTTCATCTACTACTTCAAGTTT
GGAGGCGTGCTGGTGGCCACAAGTAACCGTCTCCCCAAAGACCTGTATGCCACCAACTTC
TCCAAGACACAGTTTGAGAGTTTTCTGACCATTCTGCAGGCCCGATGTGTCACCCACAAC
ATGCAAAGTGACACTGACTACCGAGAGGTGCTTTCAGAAGAAGAGGCTGCAGAGGGTACA
GACAAGCCCATTGTCAAGTACCACGTCAACGATCCCGAGGGTGACAAGGCGTGGGAAGAG
ACAGTTAAGACTCTGTGTCCTTCTTCTGAAGGTAAGGAAGAGGAGATCATTGTGTATGGA
CGGCCTCTTGTGGTTCCCTGGGTCAAGGACGGAGTTGCCATGTTCAAGTTCAGCCAGCTG
ATTGAACGACCCCTGGCTGCTGCTGATTTCATCTCTCTGGCTTCCAGATACCATACCATC
ATTGTCGATGAGGTGCCTGTCATGACTCTGGCCAAGAAGAACGAGGCCCGTCGTCTCATC
ACTCTGCTGGATGCTGCCTACGAGTGTCGATGTCAGCTCATCATTCGAGCAGAGGCTAAT
GCCGACTCGCTCTTTTTCCCCGAGATTGATGATCCTGAAAAGATGAAGGAGGAGGCTGAT
ATCCAGGCCCAGGAAATGTACTCGGACACGCTTCAGGACATTGAGAACCCCCATCGACCC
AACGTTTCCTCCTACGACACTCCTACTGGCCAGCGAGAGTCTGATGAGAACAAGCGAGTC
ATCAAGCCAACCAACTTTGCTGACACCACCGCCTTTACCGGCGAGGACGAGAAGTTTGCC
TACAAGCGGGCTGTTTCTCGACTCAAGGAGATGACCCAGAGCCCTCATTGGAAGGTGGAC
AAGTGGATGCCTCTGCCGGACTCGGATCGGCCGTGGGAGGTGTTTTCCAAGTCGGAGAGC
TACAAGGAGCAGGAGAAGAAGCGGGCTCTGACTGACGAGGCTGCTTCTCTTGCCAGCATG
GGTTTCCGGCCTGTCAAGCAGGTTGCACCTAACGCGCCCAAATTCAACGAGTCGCATTTC
TGGTCCATGATTTCGTGGGGCGACCGAGTTCCCAAGGACGAGATTGCCGCCAGATGGCGA
AAGGGAGCCGATGTTTACCACAAGTAGGACTATATATATCAATAGTCACATACTGAATGA
ATAGATTTTGTACATAGTTATCATGATCCTTCTCAAACATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16126g_CDS-001

Protein length: 629 aa.
Product: Conserved hypothetical protein

>YALI0E16126g_CDS-001 MNLRLRTLGRTAVVRATLRNTSSLRYSSLRYSSQLALTDPLHIYQNKVASGELKADEAQL
RVAAELQKLYHRLKDYTPPQDFQRKVSALQAQLLEIEKEAAGEDMTNSQIKKKAVRPWYK
PDLKSMEMVKTLTDEEELINFNSPQGLLIHGEVGCGKSMLMDMFADSLPHQSKKRIHYNN
FMLSLYGSIHRLTQERQDRLRSAETLLGKESEALLTDYILLELAQDMIDNHTVLLLDEFM
LPDMAAAKIVKTLFIYYFKFGGVLVATSNRLPKDLYATNFSKTQFESFLTILQARCVTHN
MQSDTDYREVLSEEEAAEGTDKPIVKYHVNDPEGDKAWEETVKTLCPSSEGKEEEIIVYG
RPLVVPWVKDGVAMFKFSQLIERPLAAADFISLASRYHTIIVDEVPVMTLAKKNEARRLI
TLLDAAYECRCQLIIRAEANADSLFFPEIDDPEKMKEEADIQAQEMYSDTLQDIENPHRP
NVSSYDTPTGQRESDENKRVIKPTNFADTTAFTGEDEKFAYKRAVSRLKEMTQSPHWKVD
KWMPLPDSDRPWEVFSKSESYKEQEKKRALTDEAASLASMGFRPVKQVAPNAPKFNESHF
WSMISWGDRVPKDEIAARWRKGADVYHK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG