YALI0E15862g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E15862g

Location

Species Yarrowia lipolytica Positions 1892384..1893574
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1191 (nuc.)
Previous locus YALI0E15840g Next locus YALI0E15884g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E15862g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E15862gYALI0E15862g_mRNA-001YALI0E15862g_CDS-001

Nucleotide sequence

 

>YALI0E15862g
ATGCGAAAAGAAAGTACCAAATCCAAATACACCCCTGGACAGCGAAAGCAGACGCCTCCA
TCGCGATCCACCTCGGTCATCTACGACTCGGCCGCCCCTTCTTTGGCTGGTAGTGTGGCC
TGTTCGTTAGCATGTTCGCCCAAGTTCGGGCCCCTGGTAGACGTGCCGTTCGAGGTTCCC
GATTTCGGTCTCGACGCCGAGGACGTGGACGAGGACGTGTTTGAGCCCGCCTGTCTCTCT
TCCGACGCCTTCTACTCGGAGTTTTTCAGCCACGAAGACGCCCCCGAGTTCCGAGCTCCT
CCGTCCAAGAAACAGAAACGATCCACCCTGCCTCTCAAACAGGTGGGCATGACCAAGGCC
GAGTTCGAGGGCTCTCCCGAAACGGTGACGCAAAAAAATGACACCGTTTTCTCGTCTCTT
GATAACGTGCACGACTTTCTGTTTGGAACCGAACACTCCACCCAGGGAGGCTTCCTTGGA
GCCCCCAGCATCAAGGAGCTCAAGATTGTGGCTCCCTCGGCCAACAAGTTCACGTCGCCC
GCCAAATACGTGGCTGTTTTTGCCCTCAACCCGCCCTGCAATGTCTCCTTTGACGACACT
AAAAAGCGGGTCGAACAGTTTTTCGCCACCAAACACGACTCCTCAGCATCTTCCATCGGC
CGTATTTTCATGGGCGGAAACACCGTGGAGGCCATCACACCCGAAGTGGACGCCACCGAA
AACAACAACTTTGCTGGATTCGCCAACAGATTTGCCCTCACCGACAACTCGCAATTGCAA
ATGTATGGAACCAAGAGTGGAGGCTGGTCGGCCATGGACCCCCATTTTGAGGGCGAGCTT
GTTTCTCGAGCCCGAGTCCAGACCAACTCCGTCATGGACGACTCCCTTCAGGCAACTTAC
ACTCTCGGAAGCAGTACCAAAACCGTTCCCACCAACGTCTGTGGTCGATGGAAGCCCACT
GGACAGCTCACCCCCCTAGTCCTGGCCGGCATTCCCCAGGTGGGAATTGACGATGCCAAG
GCGCCCCGAGAGCTCACCATTCGGCTCAGCGAGGCCGTTTCCGCAAAGTATCTCTATGTG
CGATTTGTCGGAGATGACGGCGTTGACGTTGAGTCGTTTGTTGTGCGATAGAGATACAGC
ATAGAACCCACTAACTTATTTATTTATAGATAGAATAGACATTAGAGATTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E15862g_CDS-001

Protein length: 377 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E15862g_CDS-001 MRKESTKSKYTPGQRKQTPPSRSTSVIYDSAAPSLAGSVACSLACSPKFGPLVDVPFEVP
DFGLDAEDVDEDVFEPACLSSDAFYSEFFSHEDAPEFRAPPSKKQKRSTLPLKQVGMTKA
EFEGSPETVTQKNDTVFSSLDNVHDFLFGTEHSTQGGFLGAPSIKELKIVAPSANKFTSP
AKYVAVFALNPPCNVSFDDTKKRVEQFFATKHDSSASSIGRIFMGGNTVEAITPEVDATE
NNNFAGFANRFALTDNSQLQMYGTKSGGWSAMDPHFEGELVSRARVQTNSVMDDSLQATY
TLGSSTKTVPTNVCGRWKPTGQLTPLVLAGIPQVGIDDAKAPRELTIRLSEAVSAKYLYV
RFVGDDGVDVESFVVR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG