YALI0E15840g

Overview

Description highly similar to uniprot|O93968 Candida boidinii Formate dehydrogenase
Locus type CDS
Locus tag YALI0E15840g

Location

Species Yarrowia lipolytica Positions 1891162..1892268
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1107 (nuc.)
Previous locus YALI0E15818g Next locus YALI0E15862g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E15840g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E15840gYALI0E15840g_mRNA-001YALI0E15840g_CDS-001

Nucleotide sequence

 

>YALI0E15840g
ATGAAGGTCCTTCTTGTTCTTTACGATGCTGGCTCTCACGCTGCTGACGAGCCCAAGCTC
CTTGGATGCACCGAAAACGAGCTCGGTATCCGAGACTGGCTCGAGTCCCAGGGCCACACG
CTTGTCACCACCTCTTCCAAGGATGGCGCCGACTCTGTGCTCGACAAGGAAATTGTTGAC
GCCGACGTTGTCATCACCACCCCCTTCCACCCCGGCTACATCAACAAGGAGCGAATCGAC
AAGGCCAAGAAGCTCAAGATCTGCATCACCGCCGGAGTCGGCTCGGACCACGTTGATCTC
GATGCTGCCAACGCTCGAGATATCGCTGTTCTGGAGGTCACTGGTTCTAATGTCCAATCC
GTCGCTGAGCATGTTGTCATGACTATGCTCGTTCTGGTCCGAAACTTTGTCCCCGCCCAC
GAGCAGATCATTTCCGGCGGGTGGGACGTTGCGGCGGTCGCCAAGGACTCCTACGATCTA
GAGGGTAAGGTCATCGGTACCGTGGGAGGCGGCCGAATCGGTCAGCGTGTCCTCAAGCGA
TGCAAGCCTTTCGACCCCATGGAAATGCTCTACTACGATTACCAGCCCATGCCTGCCGAC
GTCGAAGAGGAGATTGGCTGCCGACGAGTCGAGTCGCTCGAGCAAATGCTTTCTCTGTGT
GATGTTGTCACTATCAACTGCCCTCTGCACGCCTCCACCAAGGGTCTCTTCAACAAGGAG
CTCATCTCCCACATGAAGGATGGAGCCTGGCTCGTCAACACTGCTCGAGGAGCCATCTGC
GTCACCGAGGACATTGTCGAGGCCCTAGAGTCCGGCAAAATCCGAGGATACGGAGGAGAC
GTCTGGTTCCCCCAGCCTGCCCCCAAGGACCACCCCTGGAGAACCATGCGAAACAATTAC
GGTGGTGGAAACGCCATGACTCCCCACATCTCCGGAACCTCCATTGATGCCCAGGGCCGA
TACGCTGAGGGTACCAAGAAGATCCTCGAGGTCTTTTTCTCGGGCAAGCAGGATTATCGA
CCCCAGGATATCATCTGTATCAACGGCCATTATGGTACCAAGGCCTACGGTGACGACAAA
GAGCATAAGGAGCATCAGCTCAAGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E15840g_CDS-001

Protein length: 369 aa.
Product: Formate dehydrogenase, putative

>YALI0E15840g_CDS-001 MKVLLVLYDAGSHAADEPKLLGCTENELGIRDWLESQGHTLVTTSSKDGADSVLDKEIVD
ADVVITTPFHPGYINKERIDKAKKLKICITAGVGSDHVDLDAANARDIAVLEVTGSNVQS
VAEHVVMTMLVLVRNFVPAHEQIISGGWDVAAVAKDSYDLEGKVIGTVGGGRIGQRVLKR
CKPFDPMEMLYYDYQPMPADVEEEIGCRRVESLEQMLSLCDVVTINCPLHASTKGLFNKE
LISHMKDGAWLVNTARGAICVTEDIVEALESGKIRGYGGDVWFPQPAPKDHPWRTMRNNY
GGGNAMTPHISGTSIDAQGRYAEGTKKILEVFFSGKQDYRPQDIICINGHYGTKAYGDDK
EHKEHQLK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG