YALI0E15642g

Overview

Description some similarities with uniprot|P22336 Saccharomyces cerevisiae YAR007c RFA1 DNA replication factor A, 69 KD subunit
Locus type CDS
Locus tag YALI0E15642g

Location

Species Yarrowia lipolytica Positions 1872999..1874842
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1844 (nuc.)
Previous locus YALI0E15620g Next locus YALI0E15664g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E15642g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E15642gYALI0E15642g_mRNA-001YALI0E15642g_CDS-001

Nucleotide sequence

 

>YALI0E15642g
ATGACGTTTGAGCTATCGACCGGATTTTTCGACGCCGTGGAGAACGCCACCAGCCGAGAT
GAGCTGCCTGAAAAGTTTCGGGCTCCAATTCTCCAGATTGTGCGGCCCATGAGCGAGCTG
CCCGGCAAGAACAGATTCAAGGTGACTCTGTTTGACGGAGAAAAGCCCGGCATGGTGTTC
GGCGACCTGGACAACCTGCCCCAAGAACGACCGGGCAAATTCGACATTGTCAAGCTCAGC
AACTTTGAGCTGGTCATGGCCAAACAGCGAGGAGTCGTCTACGTCCACCAGATGGACTTC
TTGAGCCACGCCGACGCGGCTCTGGGACTCGATACCGAAGAGGATGCTGAGCTTCCTGGT
GGCGCTGCTGCTACTGCTCCTGCTGCTGCCACCAGCAACCCCACCCCTGCCAAGCGAATG
GCTTCTACCAACGAGATTCCTGCTGGTGTCCAGGCCCAGGGATTCCCCGCCACTGTGATG
CCCATTGAGCGACTTTCGCCTTACCAGAACAAGTGGGCCATCAAGGTCCGAGTCACTTCC
AAGGCCGACAAGAAGAAGTTCTCCAACACCAAGGGAGAGGGCCAGCTCTTCAATGTCACC
TTTATCGACGAGACGGGCGAAATTCGAGCCACCGGCTTCAACCAGGAGGTGGATAAGTTC
TACCCCATGCTGGAGGAGGGCCAGGTTTACTACGTGACTCAATGCCGAGTCTCCATGGCT
AACAAGAAGTTCTCCAACGTGAACAATGACTACGAGCTGGTGTTTGGCCGAGACACGGTT
ATCATCCAGGCGGACGAGGCCGAGGCCGCTGCTATCCCCACAGCCAATTACTCGTTTGTG
ACTCTCGATAAGCTGCAGGATGTTGAAGTTGGCAACAATGTTGACGTTCTTGGTGTCGTC
CAGAACGTTGGTCCCCTGGAAGACGGCGTGGCCAAGGCTACTGGCAACCCCTATAAGCGA
CGAAACCTCATGTTGGGAGACAAGAGTGGATTTGCCACCCGTCTGACTTTCTTTGGAGAG
AAGGCCACTTCCTTCGACGAGGGAACTGTTCCTGTTGGCACCATTATCGCCATCAAGGGC
GCCCGCGTTGGCGACTTTAACGGCCGAAACCTGTCCACCAGTCACAGCTCCACTATTGCC
GTGGAACCAGCCATCGACGAGACCTACGCGCTCAAGGGATGGTATGCCTCTGAGGGTAAG
CAGACGAGCTTTAAGCAGCTGCAGACAACTACCACCAACAAGCCTGTGGCCGCCACACCC
ATTGATGTCGCCACATCCAGCTACGGACAGTCAGAAAAGCCCGACTACTACACCCTACAG
GCTTGGGTCGTGCACGTTCGAACCGGCAACTTTGCATACCCTGCTTGTCAGACTCCGGAC
TGTAACAAAAAGGTGGTCGAGCATGGTGACGAGTGGCGATGCGAAAAGTGTGAAAAGAAC
ATGGATAAACCTCTTTACAGATACATCCTCTCCATCAACGTGGGAGATGCCACAGGAAGC
ATGTGGCTGACGGCATTCAACGAGCCTGCTGAAGTGATTATGGGCATGACCGCAGATCAA
TTGACCGAGATCCAGACTAGCCAAGGAGACGATGAGTTTGAGCAAGCTGTTCAGAAGGTC
ACCGGCAAACAGTACACTCTGCGATGCCGATCCAAGCAGGAGTTTTACAACGAAGAATCC
AAGGCTCGTCACCAGGTTCTTACGGCGCAGGCGCTCGACTATCTCAAGGATATTGATGAG
CTCATCAAGGACCTCGACCAATACATGTAATGGGGGATTGGTGTTACTAGTTGTTATGAA
TGATGGGGGTATATATAGTTTATGAAAGATTGTAATTTAGCGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E15642g_CDS-001

Protein length: 590 aa.
Product: Conserved hypothetical protein

>YALI0E15642g_CDS-001 MTFELSTGFFDAVENATSRDELPEKFRAPILQIVRPMSELPGKNRFKVTLFDGEKPGMVF
GDLDNLPQERPGKFDIVKLSNFELVMAKQRGVVYVHQMDFLSHADAALGLDTEEDAELPG
GAAATAPAAATSNPTPAKRMASTNEIPAGVQAQGFPATVMPIERLSPYQNKWAIKVRVTS
KADKKKFSNTKGEGQLFNVTFIDETGEIRATGFNQEVDKFYPMLEEGQVYYVTQCRVSMA
NKKFSNVNNDYELVFGRDTVIIQADEAEAAAIPTANYSFVTLDKLQDVEVGNNVDVLGVV
QNVGPLEDGVAKATGNPYKRRNLMLGDKSGFATRLTFFGEKATSFDEGTVPVGTIIAIKG
ARVGDFNGRNLSTSHSSTIAVEPAIDETYALKGWYASEGKQTSFKQLQTTTTNKPVAATP
IDVATSSYGQSEKPDYYTLQAWVVHVRTGNFAYPACQTPDCNKKVVEHGDEWRCEKCEKN
MDKPLYRYILSINVGDATGSMWLTAFNEPAEVIMGMTADQLTEIQTSQGDDEFEQAVQKV
TGKQYTLRCRSKQEFYNEESKARHQVLTAQALDYLKDIDELIKDLDQYM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG