YALI0E14597g

Overview

Description similar to uniprot|P38088 Saccharomyces cerevisiae YBR121C (ohnolog of YPR081C) GRS1 glycine--tRNA ligase
Locus type CDS
Locus tag YALI0E14597g

Location

Species Yarrowia lipolytica Positions 1742605..1744631
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2027 (nuc.)
Previous locus YALI0E14575g Next locus YALI0E14619g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E14597g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E14597gYALI0E14597g_mRNA-001YALI0E14597g_CDS-001

Nucleotide sequence

 

>YALI0E14597g
ATGTCCACCCGACCCGCCGACCAGGAGCTCAACCGAGAGACTCTTGATGCCGTCCTCAAG
CGACGGTTCTTCTACGCCCCAGCCTTTGAGATCTACGACGGTGTTTCCGGTCTTTACGAC
TACGGCCCGCCTGGATGTGCTCTCCAGACCCGAATCATCGACACGTGGCGAGATCACTTT
GTGCTCGAGGACGACATGCTCGAGGTCGACACCACCATGCTGACTCCCCACGAGGTTCTG
AAGACCTCTGGCCACGTGGACAAGTTTGCCGACTGGATGTGCCGAGATCTGGCCTCCGGC
GAGATTTTCCGAGCCGACCATCTGGTCGAGGAGGTGCTCGAGGCCCGACTCAAGGGAGAC
AAGGAGGCCCGAGGCATCAAGGAGGACGTTGTTGAGGACGAGTCCGCCAAGAAGCGAAAG
AAGAAGGTCAAGGAGATTGTGGCCATCAAGCTCGATGACAATGTTAAGGAGGAGTACGAG
ACCATTCTTGCCAAGATTGACGGTTTCTCCGGCCCCGAGCTTGGTGAGATCATGGACAAG
TATAAGATCGTCAACCCTGTCACCGGCGGTCCCCTTGAGAAGCCCATGGAGTTCAACCTC
ATGTTCGAGACTGCCATCGGCCCCTCCGGTAAGCTCAAGGGCTTCCTGCGACCCGAGACC
GCCCAGGGCCAGTTCCTCAACTTCAACAAGCTGCTGGACTGCAACAACACCAAGATGCCC
TTCGCCTCTGCCTCCATTGGTAAGTCTTTCCGAAACGAGATTTCCCCCCGATCCGGTCTG
CTGCGAGTCCGAGAGTTCACCATGGCCGAGATTGAGCACTTTGTCGACCCTCTGGACAAG
GACCACCACCGATTCGACGAGGTCAAGGACGTCAAGCTGCGATTCCTCGCCAAGGATGTC
CAGTCCGCTGGTAAGACCGACATCCAGGAGATGACCATCGGCCAGGCCGTTGAGACCGGT
CTCGTTGACAACAAGACCCTCGGATACTTCCTTGCTCGAATCTACCTGTTCCTGATCAAG
ATTGGTGTCAACCCCGACCGACTCCGATTCCGACAGCACATGTCCAACGAGATGGCCCAC
TACGCCACCGACTGCTGGGATGCCGAGCTGCACACCTCCTACGGCTGGATCGAGTGTGTT
GGCTGTGCTGACCGATCTGCCTACGATCTGTCTGTGCACGAGGCCCGAACCAAGGTCAAG
CTGCAGGTTCAGCAGAAGCTCGACGCTCCTCTCGTCGAGGACAAGTTTGTCTGCGAATAC
GACAAGAAGAAGTTTGGTCCTCTGCTCAAGAAGGCCGCCAAGCCCGTCGAGGAGTGGTTC
GAGTCCCGAACCCAGTGCGAGCTTGAGGATCTTGCCAAGGCTCTTGAGGCCGGCAAGATT
GTCCTGCCCGAGATTGAGGGTGTCGAGGTTGCCGGCACCGAGCTTGACAAGTCTCACATC
AAGATTGAGAAAAAGACCATCACCACCCACGTTCGAGACTACACTCCCAACGTCATCGAG
CCTTCTTTCGGTATCGGACGAATCCTTTACTCTCTGATCGAGCACTGCTTCTGGACTCGA
CCCGAGGACGCCTCCGGAGCCAAGGGTGTGCTTTCTTTCCCTCCTCGAATTGCCCCCACC
AAGGTTCTTGTTGTTCCTCTCTCTTCCCAGAAGGAGCTGGCCCCCTTCACTCAGGAGGTC
TCCAAGAAGCTGCGACAGGCCCGAATCTCCGCCAAGGTCGACGACTCTTCTGCCTCTATC
GGTAAGCGATACGCCCGAAACGACGAAATGGGAACTCCCTTCGGTATTACCGTCGACTTC
GACACTGTCAAGGACAACTCTGTCACCCTCCGAGAGCGAGACTCCACTCGACAGGTTCGA
GGCTCCATCGACGCCGTCATTGCTGCCATCAACGTCATGACCGCCGACGATGTTGCCTGG
GAGGAGGCCACCAAGGACCTCACTCCTTTCGATTCCACCGACAAGGAGTAAATCCAGTAA
ACGTTCAATAAAAATATGTACAGAATAATGAGTTCAATATTGGAATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E14597g_CDS-001

Protein length: 657 aa.
Product: Cytoplasmic and mitochondrial glycyl-tRNA synthase, putative

>YALI0E14597g_CDS-001 MSTRPADQELNRETLDAVLKRRFFYAPAFEIYDGVSGLYDYGPPGCALQTRIIDTWRDHF
VLEDDMLEVDTTMLTPHEVLKTSGHVDKFADWMCRDLASGEIFRADHLVEEVLEARLKGD
KEARGIKEDVVEDESAKKRKKKVKEIVAIKLDDNVKEEYETILAKIDGFSGPELGEIMDK
YKIVNPVTGGPLEKPMEFNLMFETAIGPSGKLKGFLRPETAQGQFLNFNKLLDCNNTKMP
FASASIGKSFRNEISPRSGLLRVREFTMAEIEHFVDPLDKDHHRFDEVKDVKLRFLAKDV
QSAGKTDIQEMTIGQAVETGLVDNKTLGYFLARIYLFLIKIGVNPDRLRFRQHMSNEMAH
YATDCWDAELHTSYGWIECVGCADRSAYDLSVHEARTKVKLQVQQKLDAPLVEDKFVCEY
DKKKFGPLLKKAAKPVEEWFESRTQCELEDLAKALEAGKIVLPEIEGVEVAGTELDKSHI
KIEKKTITTHVRDYTPNVIEPSFGIGRILYSLIEHCFWTRPEDASGAKGVLSFPPRIAPT
KVLVVPLSSQKELAPFTQEVSKKLRQARISAKVDDSSASIGKRYARNDEMGTPFGITVDF
DTVKDNSVTLRERDSTRQVRGSIDAVIAAINVMTADDVAWEEATKDLTPFDSTDKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG