YALI0E14575g

Overview

Description weakly similar to uniprot|U1HGD3 Endocarpon pusillum hypothetical protein EPUS_01132
Locus type CDS
Locus tag YALI0E14575g

Location

Species Yarrowia lipolytica Positions 1739955..1742434
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2480 (nuc.)
Previous locus YALI0E14531r Next locus YALI0E14597g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E14575g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E14575gYALI0E14575g_mRNA-001YALI0E14575g_CDS-001

Nucleotide sequence

 

>YALI0E14575g
ATGAAGTTGCAACTGAGTGTACTGGCCTGTGTGGCATCGACGGTTGTCGCCGTTTTTATC
GACGAGGTTGGTGTCAACGACTGGGTACGATTAAGCGCCCCCGAAAGCATCAAAGTGCTC
GACAATGTTGCATATTTGGCATCGGCAGACGCTCTCTCTGCCCTCGACCTTTCTTCAGAC
GCCCCCAAGGGGATCAAATGGAGCCGGCGATTTTCCGACAATAGCTCAATCACACTCAAG
AATGACCACGCGATTGTGCAGGAACAAAGTGTGTCGTACGGGTTCAATTTGAAAGACGGA
GGTCTGTCATGGGAGAGCCATGAGAAGGACGTGCTCAAGGAGGGTGTTATTGTGACCACA
GAGGACGACACCTATGTGGCACAAGCTGACAACGCTCTGGGATCAATTAGGCTGTTCAAG
CTCAACCGAGGAGTGCCCGAGGAACAATGGTCCGCTACTGCTGATCCCATCAGAGACCTG
GCGGTGGTCGATATCAGCACCGGGGAGGGAGAGCAACAGGAGATCAACACTTCGGTTGTT
GCTCTTGAGGACGGACGGTCCAGCACCAAGGTCCGGATCATTTCTAAGGACTCCGACAAG
TCCATCACCATGGGTCTGTGCCAGCGACTGATCAAGTTCCAGCCCTTCGCCTCCAAGTTT
TTGGTTTCGTGTATCATCAGCGAAAAGGTGCACCTGACCCTGATCGATCTGGAGTCGAAG
AAGACTGTTACCACCAGCGTTATCGGCCAGGAGGGCCAGGTTCATGTCTCTGGTGCTGAT
ATCTTTGTGCTAGGAGATGACAAGCTGTATAAGATTGATCTTTCCGAGTTTGCGCCTGTT
CTCATCGGTGACATTCCCCATGGAAAAGACGCTGTCATTTCACTCCAGGAACAGCTTGTG
GTTCAGGACTCTGCTGCAATTGAGACGTTCGACTACTCTCTCAACAAGAAGGCTTCTGTG
GCCCAGATTCCCTTTTCTCTGACATACACTGGGTCTGACAACTTCCTTGTTGCCTCTCCT
ACGTCTCTCAACGTCCTCACTCCCGAGGGTAAGTCTCTGTGGTCTTCTCCTGTCCTCTCG
TCTATCATCACTGCTGCTTTCATTGACAAGGATGAGGTCAAGGCCGATGACGCTTTTAAC
ATCAACACCGACCCCGTGACCGCCTTTATCAACCGAATCCAGTCCCACGTTGCCCAGCTG
CCTCATCTTATCAAGTGGTTCTCTTCTCTAACCCTTGACGTTCTGGAGGTGTCTACTGAC
AACGACCACTTCTTCGAGAAGCTGCTGATTGTGGCTACTCCCTCTGGTCTCACTGCCATT
GATACCACCACCAACACCAACGCCTGGGAGGTGGATATTCCAGGTGTCACCAAACTCACC
TCTGTCGCTAACGGAGTTGTTGCTACCACACCCAATGGAGACATTGCTTACGATGCTCAC
GGAGTGGAGTTCAGTGCTCCCGAGTCTGACTCGGAGTACACCGTCAAGACCACCGGAAAC
ATTATTCAGGGATACAGGAGCGGCCAGCCCACCTGGACCTGGAGTCCTGCAGCTGGTTCC
ATCGCCAAGACCGTGTCCAAGAATCTGGACGACGAGTCTGTGTCTATTGGCACTATCCTC
GGAGACCGAACCGTGCTATACAAGTACCTGTACCCCAACGTAATTGCTGCTGCTTCCGTT
GATGAAACTGCCGGAACTCTGCTTATCACTGTGCTCGACTCTGTTACAGGTAACACCCTG
TACCAGTCTATTCACAACGACGTCAAGTCCTTCAGCGACATTGTTTTCGGCGAGTACTGG
ATCACCTACTCTTATGTTTCTGGTGGTGCCCTTCCCGGTGCCAAGCTCGTCACCTGCGAC
TTCTACGAGTCCACTACCCCCAATGAGCGAAAGTCCACTGACGAGATGTCTGCCTTTGAC
ATGTTTGTTCCCGAGACCATCTGCCAGGCCTTTGGCATCGAGTCTGAAGTTACTGCTCTA
TCTGTCTCCAAGACCACCTTTGGTATCACATCCCGAGATGTCATTGTCGCTCTTGCTGAC
GGACGAGTTGCCTCAATCCCTCGACAGGCCATCAACCCTAGACGACCCGTTGGACGAGCT
GCTACTGCTGCTGAGATGGAGGAAGGTCTGGGAACTTACGATCCCTTCCTTGCCATCTTC
CCCCAGATGCTCATTTCACACTCCTATTCTCTAAAGGGCGACATCATTGTCACCAGCGGA
GCTACTTTGGAGTCGACTTCTCTGGTGGCTGTTCTATCCACCAACGGAGACATTTTCTTC
ACCCGAATCTTCCCTTCCACCGCCTTCGATCTCATGAAGCCCAATTTCAGCAAGAAGAAC
CTCGTGTACACTGTGCTGGCCCTGGGTATTGCCGTGCGATACATGGGCCCCGTGGTCGCC
AAAAGACTCAACAACCAAAAGTGGGGTGTTGGTCTCATTGAGAAATAAGAAATAACGATA
ATACATGTTTGACTAGATGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E14575g_CDS-001

Protein length: 816 aa.
Product: Conserved hypothetical protein

>YALI0E14575g_CDS-001 MKLQLSVLACVASTVVAVFIDEVGVNDWVRLSAPESIKVLDNVAYLASADALSALDLSSD
APKGIKWSRRFSDNSSITLKNDHAIVQEQSVSYGFNLKDGGLSWESHEKDVLKEGVIVTT
EDDTYVAQADNALGSIRLFKLNRGVPEEQWSATADPIRDLAVVDISTGEGEQQEINTSVV
ALEDGRSSTKVRIISKDSDKSITMGLCQRLIKFQPFASKFLVSCIISEKVHLTLIDLESK
KTVTTSVIGQEGQVHVSGADIFVLGDDKLYKIDLSEFAPVLIGDIPHGKDAVISLQEQLV
VQDSAAIETFDYSLNKKASVAQIPFSLTYTGSDNFLVASPTSLNVLTPEGKSLWSSPVLS
SIITAAFIDKDEVKADDAFNINTDPVTAFINRIQSHVAQLPHLIKWFSSLTLDVLEVSTD
NDHFFEKLLIVATPSGLTAIDTTTNTNAWEVDIPGVTKLTSVANGVVATTPNGDIAYDAH
GVEFSAPESDSEYTVKTTGNIIQGYRSGQPTWTWSPAAGSIAKTVSKNLDDESVSIGTIL
GDRTVLYKYLYPNVIAAASVDETAGTLLITVLDSVTGNTLYQSIHNDVKSFSDIVFGEYW
ITYSYVSGGALPGAKLVTCDFYESTTPNERKSTDEMSAFDMFVPETICQAFGIESEVTAL
SVSKTTFGITSRDVIVALADGRVASIPRQAINPRRPVGRAATAAEMEEGLGTYDPFLAIF
PQMLISHSYSLKGDIIVTSGATLESTSLVAVLSTNGDIFFTRIFPSTAFDLMKPNFSKKN
LVYTVLALGIAVRYMGPVVAKRLNNQKWGVGLIEK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG