YALI0E14036g

Overview

Description similar to uniprot|B2VSC0 Pyrenophora tritici- repentis Sec23/Sec24 family protein
Locus type CDS
Locus tag YALI0E14036g

Location

Species Yarrowia lipolytica Positions 1689163..1692160
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2998 (nuc.)
Previous locus YALI0E14014g Next locus YALI0E14058g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E14036g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E14036gYALI0E14036g_mRNA-001YALI0E14036g_CDS-001

Nucleotide sequence

 

>YALI0E14036g
ATGGCTTCGAAAAAAAGATCGGCCAGAGCCTTCCACGACCTCGGTGCAGACCCCAATGCG
CCCAATGGCAACCCCCTCATGTCGCCGGACCTCTCACAGCCCATGTACGGGGTTCCTCCT
GCCGGCCAAGTTGCAGCTGATTCTCCCTACGGAGGAGCCCAGTTCGGTTACGAGGCCCAC
AATCCAGCCATTCCTCATGGACAACCTGCCTACGGTCATGCTGCCTCCCCTGCTGTGTCT
CATGGAGCCCCTCTGGCCCATTCTTTTGCTCAGATGAGCCTGAACGCCTCGGAACAGGAG
GGGTTCGGCCACGACGCAGCAAACCCTTCTCTGGAGCGTGGCAACCAAGGAATTCCTTCG
CTGGCAGCTCGACGAAACGATGCGCGAGAATACACCGCTCGAAAACCCGTGTTCAAAACG
TTTCAGAACACCCTACCCCCTCCTGCCACCGCCGAATATCTCTGTGAGGATCAGGGAGTG
TCTGCTCCTCCCTTTTGTCGTCTCTCCATGTACAACGTGCCAGTTTCCGATCAGCTGCGG
TCTCTGACTAAGCTGCCCCTCGGTATGGTGGTCAAGCCCTTTGCTGAACGAGACGTTCCC
GTGGCCGACTTCTCGCAGATCGAGCCCTTCCGATGTCGACGATGCATGGCCTTCATTAAC
CCGCAGTTCCTGTTCTCTAACGGCGGATCTCGAGCCGTCTGTAACATGTGCCAGTTCCCC
AATGCGGTTCCCGGAGAGTACTTCCAGCCCACCGACCACAACGGAGCTCGAGTCGATGTC
GCCGAACGAGCTGAGCTGTTTGCTGGCACCTACGACATGGTCGTTCCCGACTCTTACTAC
CCCGAGGGAGACTCTCGAGAACCCGTCAAGCACCTGTTTGTCATTGATGTGTCGGACGAG
GCTATCAAGAAGGAGCTGCCCTCTCTGGCTGCCGAGGCTATCAGAAAAGCCCTTGATGAG
GACGATACCCCCAAGAAGATCGGTATCATCACCTTCGACCACGCTCTGCAGTTCTACAAT
CTGAATGCGGATCTGGAGAAACCCCATATGGTCGTTTCTAATGATCTAAAGGACCCCTTT
GTGCCCTTTGAGGACGGTCTGTTTGTGGACGCCCAGGAGTCGCGGCATGTGATTGAAGAT
CTGCTCCCCCGGCTGCAGTCCATGTTTGAGGGCTACAAGTACGCCGAGTCTGCCTTTGGA
GCAGCTGTTTCCACTGCCCACAAGGTGCTGTCTGCGTTTGGAGGAGGAAAGGCCCATCTG
GTTCTCGGATCAACCCCTACCTGGGGTCCTGGAAGTGTTTTCCCTAACAACCTCGAAAAT
CGAAAAACTGCGTCCAAGGAGCCCAAGAACTTTGACTGCAAGGACCCTTTCTACACCGAG
CTGGCGGGCAAGTACGCCAAGGACGGCGTGGGTCTGGATGTGTTTGTCATGCCCAGCAGT
GTCACTGATCTGGTCACTCTAGGCTATATTTCTGCCAAGTCTGGCGGAACCACCAAGCAT
TACCCAAACTTTGTGCCCATTCGAGACGGCAAGCGGTTCATGGCTGACTTGGCCCACTCC
GTGACTTCTCTTCGAGCTTGTGGAGCCAAGCTCAAGGTCCGATGCTCCACGGGTCTGCAG
GTTGCCGCCTATTACGGCAGCTTCCACTCCGACGACTGGCATATTGAGCCCGATGTGGGA
TCTGTCGACTCCGACAGCACTTACGGCATTCTGTTTTCGTACGACGGAAAGCTCGACACC
AAGCTGGATGCCCACTTTCAGACTTCGCTGCTGTATAAGCATCTGGACGGTACTCGACGT
CTGCGAGTTATTAACGTGCTTGCTGGAGTCACCGAGCAGTTCAAGCCTGCAATTAACTTT
GTCGATGCCGATGCTTGCTTCTCCATCATGGCCCGAAACCTGTTTTCCAAGGTCACCTCC
ACCACTCTCAAGGAGGCTCGGTTTGGTCTCAATGAGCGACTGGTGGAAGTGTTTGCCTCT
TACCGAAAGAACACCACCGAGGTTCTCCCTGCTACACAACTGCTCCTACCCACTTCTCTG
CGACCTCTGCTGATCCAGTCTCTTGCGCTGCTCAAGTCTCCTCTTCTGCGAGACACTGTG
ACTTCTCTGGACAGACGAATCCAGTACCTGCGAGAAGCCAACAACAGCGACGTGGACAAG
TTTTCTTACATGCTCTACCCTTACCTTTTCGCTCTGCATAACATGCGAGAGATTGACGGA
AGTGCTATTGAGAACGGCCATTTTGTTCTGCCCGATTCTCTGGCTCCCTCTCTGGCCTCT
CTGGAGGAAGGTGGTGCATACATGCTCTTCAACGGCGAGAAGCTTTATTTATGGCTTCCC
AGTACTGTTTCTCCCCAGCTGCTTAACGATCTGTTTGGTGAGGACAACAACATCACCCGG
GACCTGGACCCTTATATGAACTCCATTCCCGAGGTCGACAGCCACATCAACAAGCAGGTT
CGAGCTCTAGTGGCCCACTTTGAGGGTCTTCTGGGCATCAGCCATCTCAACGTTCAGCTG
TGTCGACCCAACCTGGATGGTGCTGAGATGGAGTTCCAGTCTCTGCTGGTGGAGGACCGA
AACATGGGCGAGTACGCCTACACGGACTTTGTGTCTCACATTCACCGACACGTCAAGTTG
ATGATGGAGAACAGCAGCATGAAGATGACTAGCAAGACGCTTTTGAATGATGCCATCGGA
TACAGGGAGGCTGGCTTGTGATGAAGAGAAGGCAGAAGAAGGTACTGGTAATTCAGGTGG
AGGAGGAAGAAAGAACGAGGATATAATACTGTTAAAAGAGTGAGTTATTAGGAGAGGGCT
GTGTATGGAATGGGTGCTGTAGGGGAGGGGTTGTTGACAGGACCCAGTATGATAGCTAAA
GTAGTCATCCATCTTCCACCGTTTCTTTGTCATCCACGATATATCATGATGTTGTCATGC
ACCTGAACTCTATATGTGTTGATATATGTAATTTGCCAAACTAAAACTTTTCCATTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E14036g_CDS-001

Protein length: 907 aa.
Product: Sec23/Sec24 family protein, putative

>YALI0E14036g_CDS-001 MASKKRSARAFHDLGADPNAPNGNPLMSPDLSQPMYGVPPAGQVAADSPYGGAQFGYEAH
NPAIPHGQPAYGHAASPAVSHGAPLAHSFAQMSLNASEQEGFGHDAANPSLERGNQGIPS
LAARRNDAREYTARKPVFKTFQNTLPPPATAEYLCEDQGVSAPPFCRLSMYNVPVSDQLR
SLTKLPLGMVVKPFAERDVPVADFSQIEPFRCRRCMAFINPQFLFSNGGSRAVCNMCQFP
NAVPGEYFQPTDHNGARVDVAERAELFAGTYDMVVPDSYYPEGDSREPVKHLFVIDVSDE
AIKKELPSLAAEAIRKALDEDDTPKKIGIITFDHALQFYNLNADLEKPHMVVSNDLKDPF
VPFEDGLFVDAQESRHVIEDLLPRLQSMFEGYKYAESAFGAAVSTAHKVLSAFGGGKAHL
VLGSTPTWGPGSVFPNNLENRKTASKEPKNFDCKDPFYTELAGKYAKDGVGLDVFVMPSS
VTDLVTLGYISAKSGGTTKHYPNFVPIRDGKRFMADLAHSVTSLRACGAKLKVRCSTGLQ
VAAYYGSFHSDDWHIEPDVGSVDSDSTYGILFSYDGKLDTKLDAHFQTSLLYKHLDGTRR
LRVINVLAGVTEQFKPAINFVDADACFSIMARNLFSKVTSTTLKEARFGLNERLVEVFAS
YRKNTTEVLPATQLLLPTSLRPLLIQSLALLKSPLLRDTVTSLDRRIQYLREANNSDVDK
FSYMLYPYLFALHNMREIDGSAIENGHFVLPDSLAPSLASLEEGGAYMLFNGEKLYLWLP
STVSPQLLNDLFGEDNNITRDLDPYMNSIPEVDSHINKQVRALVAHFEGLLGISHLNVQL
CRPNLDGAEMEFQSLLVEDRNMGEYAYTDFVSHIHRHVKLMMENSSMKMTSKTLLNDAIG
YREAGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG