YALI0E14014g

Overview

Description some similarities with uniprot|P39875 Saccharomyces cerevisiae YOR033C (ohnolog of YDR263C) DHS1 exonuclease 5- prime end
Locus type CDS
Locus tag YALI0E14014g

Location

Species Yarrowia lipolytica Positions 1687078..1688718
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1641 (nuc.)
Previous locus YALI0E13992g Next locus YALI0E14036g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E14014g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E14014gYALI0E14014g_mRNA-001YALI0E14014g_CDS-001

Nucleotide sequence

 

>YALI0E14014g
ATGGGAGTGTCTGGACTACTACCCCTGCTCAAGCCGATCCAGGCGGCAGCTCACATTTCC
GAATTCAAGGGCCAGCGACTGGCAGTGGACGGGTTTGCATGGTTACACAAGGCCGCGTTT
GGAAGCGCCGAAGACCTGGCTCTCAACAGGCCGACAGATCGACCCCAACAGTGGGTCATG
CGCAAAGTGGAGTTTCTGAAACGGTGTGGAGTGGACGTGCTAATTGTCTTTGATGGAGGA
GCACTGCCTTCCAAGCGTGGGACCGACGAGAAACGACACGCACTACGTGACCAGGCCCAC
AAGGAAGCCCTTGCATTGATGTCTCGAGGACGAAGATCCGAAGCTGTCAACCTTTTCCAA
AAAGCCACCAGAATCACACAGGAAATGGTCCACCAACTGACAGAACTGCTCAAGAGTCAA
CGTATTCCTTTTGTGGTTGCACCCTACGAAGCAGACGCCCAGCTGGTGTACCTGGAGAAG
GCAGGTTACGCCACAGGCATCATTTCGGAAGACTCAGATCTTGTGGTCTACGGAGCACAG
ATGCTGGTCACAAAGCTGGACCCGAGTGGAGGATGCGTCACAGTTGATGGATCCCGAATT
TCCAGCTGCTCAGATCTCGAACTCGGCTCTGAGGTTCCTCTTGAGTACCTGAGATACATG
GCTATTCTATCTGGCTGTGACTATTGCGATGGAGTGCCGAACGTGGGTCCTAAACGAGCT
GCTCGGTACATTCGACGATGGCAAACTCCCGAGGCTATCATTAAGGCTCTTCGTATGGAC
GGATACAACTCCTCACCCGACTTTTTAGAACGATTCCATGCTGCCAACTTTACATTTCTC
TACCAACGAGTCTACTGCCCCGAGGCTCGTAGGCTGGTACATTTGAATGAGCCTGAAGAT
GAGCTGGACGAAAAGGTCGACTTTCACATTGGCGCCGAGATTCCACAAGGTCTGGCGCGA
GCAATAGCCACTGGACTGGTGCACCCTCGAACTCATAAGACTTTTCCTGCCAACAAGACA
GCCAAGCCTACCAATCTACGGGGATTCTTTGCGCCCAAAAATGAGTACACAGGCGATGTC
AAGCGACTTCCCGAACAGCTGCGCCGCAAGAAGCCCGTTGTTCTGGTGGCAAAGCCGGTT
GACCTGGCTGTGCGAACAGCTTCTGCGGAGAACATGTTGAGTCCAACCCGAACGAAGACG
TCCCCCGCGCTTACTTCCAGTCACTTTTTCTCCATCCCTTCGAGTCCCGATCAGGCTGAG
AAGGAGAACAAGCCCTTCAACTTCAATACCATGTTGAGTTCAGAGCCTGACCGAAGCGAC
GATGACATTGAAGAAAGCAGCATCGTGTTTGGCACCCCAAACAAAGACACCACGCTACCG
CAGACACCTGTGACTTGTGCCAAGCGGAAGTCTACTCTGTTTGAGGAGTTTGGATACAAT
GCCTCTACGCCCAAGCGTCGAGTAGTGACTCCTACAGGCTCCTCTGGTGTTGCCAAAAAG
CCCACAATCACGCCCACAATCACGCCCAGTTCCACACCGCAAGCGCGTCCCAAGAAGAGC
GCCATTTCTCCTCTGACCGTGCAGCGTGTTCCTGGCTCGTCTCAAAGCAATCTCATGAGA
TTTGCTTACAAGGCCAACTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E14014g_CDS-001

Protein length: 547 aa.
Product: Conserved hypothetical protein

>YALI0E14014g_CDS-001 MGVSGLLPLLKPIQAAAHISEFKGQRLAVDGFAWLHKAAFGSAEDLALNRPTDRPQQWVM
RKVEFLKRCGVDVLIVFDGGALPSKRGTDEKRHALRDQAHKEALALMSRGRRSEAVNLFQ
KATRITQEMVHQLTELLKSQRIPFVVAPYEADAQLVYLEKAGYATGIISEDSDLVVYGAQ
MLVTKLDPSGGCVTVDGSRISSCSDLELGSEVPLEYLRYMAILSGCDYCDGVPNVGPKRA
ARYIRRWQTPEAIIKALRMDGYNSSPDFLERFHAANFTFLYQRVYCPEARRLVHLNEPED
ELDEKVDFHIGAEIPQGLARAIATGLVHPRTHKTFPANKTAKPTNLRGFFAPKNEYTGDV
KRLPEQLRRKKPVVLVAKPVDLAVRTASAENMLSPTRTKTSPALTSSHFFSIPSSPDQAE
KENKPFNFNTMLSSEPDRSDDDIEESSIVFGTPNKDTTLPQTPVTCAKRKSTLFEEFGYN
ASTPKRRVVTPTGSSGVAKKPTITPTITPSSTPQARPKKSAISPLTVQRVPGSSQSNLMR
FAYKAN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG