YALI0E13618g

Overview

Description highly similar to uniprot|O60143 Schizosaccharomyces pombe 60S ribosomal protein L7-C
Locus type CDS
Locus tag YALI0E13618g

Location

Species Yarrowia lipolytica Positions 1649936..1650832
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 897 (nuc.)
Previous locus YALI0E13596g Next locus YALI0E13640g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13618g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13618gYALI0E13618g_mRNA-001YALI0E13618g_CDS-001

Nucleotide sequence

 

>YALI0E13618g
ATGCCTGCCGGAACCGTGCCCACCAAGGATGACGTTCTCGTTCCCGAGACTCTCCTGAAG
AAGCGAAAGAACGCCGACCAGATCCGAGCCGCCAAGGAGGCTGCTGCTGCCGAGAAGAAG
GCCGCTAACGCCGAGAAGGACAAGGTCATCTTCTCCCGAGCCGAGAAGTACGTCAAGGAG
TACCGAGAGGCCGAGCGAGAGCAGATCCGACTCCGACGAGAGGCCAAGCTCAACGGCACC
TTCTACGTCCCCGCCGAGCCCAAGCTCGTGTTCGTTATCCGAATCAAGGGTATCTCCAAG
ATGGCCCCCAAGCCCCGAAAGGTCCTGCAGCTCCTGCGACTCCACCAGATCAACAACGGT
GTCTTTGTGCGAATCACCAAGGCTACCGCCGAGCTTCTGCGAATCGTCGAGCCCTACATT
GCCTTCGGTTACCCCAACCTGGCCTCCGTTCGACAGCTCGTCTACAAGCGAGGATACGGT
AAGGTCAACAAGCAGCGAATCCCTCTTTCCGACAACGCCATCATTGAGGAGGCTCTCGGC
AAGTACGGCATCATCTGCATGGAGGATCTGATCCACGAGATCTACACTGTTGGCCCTGCC
TTCAAGCAGGCTTCCAACTTCCTGTGGCCCTTCAAGCTCTCCAACCCCTCCGGCGGCTGG
GGTGTCCGACGAAAGTTCAAGCACTACATCGAGGGTGGCTCTACCGGTAACCGGGAGGAG
AACATCAACGCTCTCATCAAGGCCCAGAACTAAGTCTGTCTTTTGACGCAAAAATAAAAT
AAAATTATTCATTGAACGGACCACAGACTTTCATCAGTCGCCGTGTCTCAGTAAATTAAT
GTAGCTTGTATGTACAAGTAATAAAGTGCAATACAAGAAATCTAACCGTTTATTCCA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E13618g_CDS-001

Protein length: 251 aa.
Product: Ribosomal 60S subunit protein L7, putative

>YALI0E13618g_CDS-001 MPAGTVPTKDDVLVPETLLKKRKNADQIRAAKEAAAAEKKAANAEKDKVIFSRAEKYVKE
YREAEREQIRLRREAKLNGTFYVPAEPKLVFVIRIKGISKMAPKPRKVLQLLRLHQINNG
VFVRITKATAELLRIVEPYIAFGYPNLASVRQLVYKRGYGKVNKQRIPLSDNAIIEEALG
KYGIICMEDLIHEIYTVGPAFKQASNFLWPFKLSNPSGGWGVRRKFKHYIEGGSTGNREE
NINALIKAQN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG