YALI0E13596g

Overview

Description some similarities with uniprot|P48743 Saccharomyces cerevisiae YLR176c RFX1 repressor of DNA damage-inducible genes
Locus type CDS
Locus tag YALI0E13596g

Location

Species Yarrowia lipolytica Positions 1643614..1645772
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2159 (nuc.)
Previous locus YALI0E13574g Next locus YALI0E13618g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13596g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13596gYALI0E13596g_mRNA-001YALI0E13596g_CDS-001

Nucleotide sequence

 

>YALI0E13596g
ATGGAGGTGGCCATGGATGGAAGCCACAATGGGCGCCGGAAATGCGCTCGGCGAAGCTCG
TCTGCCGAGCTGCTCGAAAAACCGGAGTCGGACCTTTTGACACAAATGTACCACATGCGC
AACGACGACTCGCTGGCCGACGCTCTCACCAACAACGAAAGCGAGCATTCCAACGTGTCC
ACTTCGTCGGCAGCGTCGGCGTCGACCGCCGCAACCTCGGCCTCGATGATGGACTCCCAG
GTGTACACAAACAAGCAAAACACAGCCGCCAACAACGTGACCCCGGCGCCCAATAACACA
GACATGCGGCCTCCCGAGTCGCCGGGCCCGGGCTCGTCGGCGTCGCGAAAACGCAAGGCA
CCAATGGCGTCGTCGGAGGAAATCGACGCAGAGCTGCGCAGAGCCGCAGAGCAACTGGTG
GGCCTGCCAATTGAAGATATTGTGGAAACCCTGCGTCGACAGGACTCGCCCGCCGGCAGA
GGCCATGGCAACGAGCGCACCAAGCAGACCTTTGGCATGGCCTGGCTCATGAAGTTCTGC
GAGCTCAATGAGCAGTCGTCGGTCCTGCGATCCCGCATCTACGCCCGCTACGTGACCATG
TGTTCGCAACACAATGTGCGGCCCATGAACCCGGCATCGTTTGGCAAGCTCGTGCGCGTC
ATCTACCCCGACCTGACCACGCGACGACTGGGAGTTCGTGGCCAGAGCAAGTACCATTAC
TGCGGCATCCGGCTCACCGGCGAGGCCGAGGAGATCTCTACCCCCGGGCCTGGATCGCCT
GATCGGGCCTTCACCCCCGAATTGACTCCCTTCGACTCGCCCTACGGGTTCCGTGGCAAG
ACTGAGACTCCCGACTACGCGCTGGGCCTCAACTCCATGATGGCGTCCCAGCCCGGCACG
CCACAGCAGCATATCCAAAATCATCAGCAGCAGCATCTGCAACAAAATCACCAACAGCAT
CATCAACAGCAACAGCAGCAGCAGCAACATCAACAACATCAACAACAGCAGCAGCAACAG
CAACAACAACAACAACAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACACATA
ATGGGAACCCCCCAACCAGGCGTACCCGACCTTCGTTTCGTGTCGAACCTAACGGAAGTG
TCACTATCAGAAGGCTACGACTCCCTCATGCTGCCCTCGATGGAGCCGTACCTTCCTCTG
GGCACTGACAGCGACACCGCCAACACGCTAGCGGCGCTCTACAAGGCCCACTGCCAGTCG
CTGGTCGAATCGCTACGGTTCATGCATATCAGAAAATTTCTCCACATTCATGGAGCTTTC
ATTGGGGGCCTGACATCCACAGTTCAAAAGCTGTATCGACATGAGTCGCTGCAGCCGTGG
GTGGCCAAGGCCGACTGGATTATGTACAAGGACATGGTCCAGATGCTGTCGCCTTTGGCG
CTGCAGGAGATTCCTCCACAGGTCCTGTCGGGTCTCAAGAGCTTGTCGCAATACTTGCCC
GAGTACCTCAAGTCGTCTTTGTGCAAGACGTCGCCGGGGTTTGTGGAGACCAAGCTCAAG
CCCGCGCGGGCGTTTGCATCACTGCTGATGCGGCTGGTGCGGGTGTCGGAGCTGGCTCTC
AACGCCGGCAAGCTGCTGGCGTCCGACCACGACCGAGCGGTGATGAAAAACGATTGGATC
AAGTACGTGGACAGCGGGCTGATAGTGGCTCGAGACGTTCCGTGCTCATCACAGGAGGTG
ACCAAGATTCTCGACGTCGACCTTCCGCAGCTGCTGGACTACAAGGATCCGGTGGCGTCG
GCTATAGTGGAGCACTGGGCAATGTACCTGATGACTCTTCCGTCGCGGTTCACCAACGTG
TACCCCCATATGTTTCTGCTTTACATGAACGCTGTGTTTACAGCCGCACTACGGGAGATT
TTTCTCAACGGAGGAGACGGGTTTGGAGCGTGGATGGTGGTTCGGTGCTGGGTGGATGAA
TGGATGGGATGGACGGCCGAACAGGGCACGTTTCTGTCTGCCGACCACAACAAGGAGGTC
AACAAGCATGAGAACAAGGAAGGGACGCCCCATGGCAACCCCGCCAAGTTTCTCGACATG
ACTGTGGGGTTGCTCAAGCCCACCCACAAGGATGCATAGATAAATTATTAGGTGGATGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13596g_CDS-001

Protein length: 713 aa.
Product: Conserved hypothetical protein

>YALI0E13596g_CDS-001 MEVAMDGSHNGRRKCARRSSSAELLEKPESDLLTQMYHMRNDDSLADALTNNESEHSNVS
TSSAASASTAATSASMMDSQVYTNKQNTAANNVTPAPNNTDMRPPESPGPGSSASRKRKA
PMASSEEIDAELRRAAEQLVGLPIEDIVETLRRQDSPAGRGHGNERTKQTFGMAWLMKFC
ELNEQSSVLRSRIYARYVTMCSQHNVRPMNPASFGKLVRVIYPDLTTRRLGVRGQSKYHY
CGIRLTGEAEEISTPGPGSPDRAFTPELTPFDSPYGFRGKTETPDYALGLNSMMASQPGT
PQQHIQNHQQQHLQQNHQQHHQQQQQQQQHQQHQQQQQQQQQQQQQQQQQQQQQQQQQHI
MGTPQPGVPDLRFVSNLTEVSLSEGYDSLMLPSMEPYLPLGTDSDTANTLAALYKAHCQS
LVESLRFMHIRKFLHIHGAFIGGLTSTVQKLYRHESLQPWVAKADWIMYKDMVQMLSPLA
LQEIPPQVLSGLKSLSQYLPEYLKSSLCKTSPGFVETKLKPARAFASLLMRLVRVSELAL
NAGKLLASDHDRAVMKNDWIKYVDSGLIVARDVPCSSQEVTKILDVDLPQLLDYKDPVAS
AIVEHWAMYLMTLPSRFTNVYPHMFLLYMNAVFTAALREIFLNGGDGFGAWMVVRCWVDE
WMGWTAEQGTFLSADHNKEVNKHENKEGTPHGNPAKFLDMTVGLLKPTHKDA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG